Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ECHDC1Q9NTX5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ECHDC1Q9NTX5 AC233723.2-201ENST00000623798 2106 ntBASIC26.77■■□□□ 1.88
ECHDC1Q9NTX5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
ECHDC1Q9NTX5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 AC008764.7-201ENST00000593779 1081 ntBASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 AC068587.7-201ENST00000641602 218 ntBASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
ECHDC1Q9NTX5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 MIR638-201ENST00000385237 100 ntBASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 MIR939-201ENST00000401314 82 ntBASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 SUDS3P1-201ENST00000505831 966 ntBASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 AC127496.7-201ENST00000625110 1798 ntBASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ECHDC1Q9NTX5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 AP005435.1-201ENST00000529293 1178 ntBASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 AF213884.3-201ENST00000563833 479 ntBASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 AL136967.2-201ENST00000623968 743 ntBASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
ECHDC1Q9NTX5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ECHDC1Q9NTX5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
ECHDC1Q9NTX5 AC027682.1-201ENST00000562846 899 ntBASIC26.73■■□□□ 1.87
ECHDC1Q9NTX5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.73■■□□□ 1.87
ECHDC1Q9NTX5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.73■■□□□ 1.87
ECHDC1Q9NTX5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.73■■□□□ 1.87
ECHDC1Q9NTX5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ECHDC1Q9NTX5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ECHDC1Q9NTX5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ECHDC1Q9NTX5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 AC099791.1-201ENST00000416440 715 ntBASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 AC005837.3-201ENST00000612163 286 ntBASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
ECHDC1Q9NTX5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ECHDC1Q9NTX5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.71■■□□□ 1.87
ECHDC1Q9NTX5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ECHDC1Q9NTX5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.71■■□□□ 1.87
ECHDC1Q9NTX5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ECHDC1Q9NTX5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
ECHDC1Q9NTX5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ECHDC1Q9NTX5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ECHDC1Q9NTX5 AC137767.1-201ENST00000602918 1920 ntBASIC26.71■■□□□ 1.87
ECHDC1Q9NTX5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
ECHDC1Q9NTX5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
ECHDC1Q9NTX5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ECHDC1Q9NTX5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ECHDC1Q9NTX5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ECHDC1Q9NTX5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ECHDC1Q9NTX5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.7■■□□□ 1.86
ECHDC1Q9NTX5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.7■■□□□ 1.86
ECHDC1Q9NTX5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ECHDC1Q9NTX5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ECHDC1Q9NTX5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ECHDC1Q9NTX5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
ECHDC1Q9NTX5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ECHDC1Q9NTX5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ECHDC1Q9NTX5 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.69■■□□□ 1.86
ECHDC1Q9NTX5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ECHDC1Q9NTX5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.69■■□□□ 1.86
ECHDC1Q9NTX5 RASA4CP-201ENST00000424092 1398 ntBASIC26.69■■□□□ 1.86
ECHDC1Q9NTX5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ECHDC1Q9NTX5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
ECHDC1Q9NTX5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ECHDC1Q9NTX5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms