Protein–RNA interactions for Protein: Q99816

TSG101, Tumor susceptibility gene 101 protein, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101Q99816 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TSG101Q99816 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TSG101Q99816 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.15■■□□□ 1.46
TSG101Q99816 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TSG101Q99816 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
TSG101Q99816 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.15■■□□□ 1.46
TSG101Q99816 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
TSG101Q99816 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
TSG101Q99816 AC099791.2-201ENST00000605725 427 ntBASIC24.15■■□□□ 1.46
TSG101Q99816 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.15■■□□□ 1.46
TSG101Q99816 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TSG101Q99816 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TSG101Q99816 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
TSG101Q99816 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
TSG101Q99816 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.15■■□□□ 1.46
TSG101Q99816 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.14■■□□□ 1.46
TSG101Q99816 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TSG101Q99816 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TSG101Q99816 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TSG101Q99816 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.14■■□□□ 1.46
TSG101Q99816 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TSG101Q99816 AC006455.2-201ENST00000429931 906 ntBASIC24.14■■□□□ 1.45
TSG101Q99816 SRD5A1P1-201ENST00000442297 786 ntBASIC24.14■■□□□ 1.45
TSG101Q99816 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.14■■□□□ 1.45
TSG101Q99816 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.14■■□□□ 1.45
TSG101Q99816 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.14■■□□□ 1.45
TSG101Q99816 pRNA.6-201ENST00000610482 90 ntBASIC24.14■■□□□ 1.45
TSG101Q99816 pRNA.5-201ENST00000612139 90 ntBASIC24.14■■□□□ 1.45
TSG101Q99816 pRNA.11-201ENST00000618423 90 ntBASIC24.14■■□□□ 1.45
TSG101Q99816 pRNA.13-201ENST00000619112 90 ntBASIC24.14■■□□□ 1.45
TSG101Q99816 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
TSG101Q99816 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.14■■□□□ 1.45
TSG101Q99816 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.13■■□□□ 1.45
TSG101Q99816 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TSG101Q99816 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.13■■□□□ 1.45
TSG101Q99816 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TSG101Q99816 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TSG101Q99816 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.13■■□□□ 1.45
TSG101Q99816 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSG101Q99816 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSG101Q99816 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
TSG101Q99816 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSG101Q99816 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TSG101Q99816 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TSG101Q99816 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TSG101Q99816 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.12■■□□□ 1.45
TSG101Q99816 AC133637.1-201ENST00000624115 1537 ntBASIC24.12■■□□□ 1.45
TSG101Q99816 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.12■■□□□ 1.45
TSG101Q99816 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.12■■□□□ 1.45
TSG101Q99816 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
TSG101Q99816 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSG101Q99816 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSG101Q99816 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSG101Q99816 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.11■■□□□ 1.45
TSG101Q99816 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSG101Q99816 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.11■■□□□ 1.45
TSG101Q99816 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TSG101Q99816 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.11■■□□□ 1.45
TSG101Q99816 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
TSG101Q99816 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSG101Q99816 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSG101Q99816 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSG101Q99816 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.11■■□□□ 1.45
TSG101Q99816 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSG101Q99816 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSG101Q99816 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
TSG101Q99816 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
TSG101Q99816 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.1■■□□□ 1.45
TSG101Q99816 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TSG101Q99816 LINC00565-201ENST00000562710 2331 ntBASIC24.1■■□□□ 1.45
TSG101Q99816 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
TSG101Q99816 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TSG101Q99816 AC092171.4-201ENST00000609130 632 ntBASIC24.1■■□□□ 1.45
TSG101Q99816 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TSG101Q99816 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
TSG101Q99816 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.1■■□□□ 1.45
TSG101Q99816 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TSG101Q99816 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TSG101Q99816 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.1■■□□□ 1.45
TSG101Q99816 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
TSG101Q99816 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TSG101Q99816 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TSG101Q99816 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.09■■□□□ 1.45
TSG101Q99816 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TSG101Q99816 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.09■■□□□ 1.45
TSG101Q99816 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.09■■□□□ 1.45
TSG101Q99816 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TSG101Q99816 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.09■■□□□ 1.45
TSG101Q99816 AL512631.2-201ENST00000604634 923 ntBASIC24.09■■□□□ 1.45
TSG101Q99816 CA15P2-201ENST00000611168 834 ntBASIC24.09■■□□□ 1.45
TSG101Q99816 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.09■■□□□ 1.45
TSG101Q99816 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
TSG101Q99816 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
TSG101Q99816 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TSG101Q99816 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TSG101Q99816 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TSG101Q99816 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TSG101Q99816 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TSG101Q99816 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
TSG101Q99816 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms