Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF2Q99496 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF2Q99496 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF2Q99496 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF2Q99496 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF2Q99496 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF2Q99496 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF2Q99496 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF2Q99496 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF2Q99496 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RNF2Q99496 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF2Q99496 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF2Q99496 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF2Q99496 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF2Q99496 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF2Q99496 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF2Q99496 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF2Q99496 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RNF2Q99496 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RNF2Q99496 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF2Q99496 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF2Q99496 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF2Q99496 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF2Q99496 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF2Q99496 SNX5-217ENST00000606557 1087 ntBASIC17.33■□□□□ 0.36
RNF2Q99496 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF2Q99496 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF2Q99496 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF2Q99496 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF2Q99496 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF2Q99496 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF2Q99496 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF2Q99496 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF2Q99496 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
RNF2Q99496 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF2Q99496 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF2Q99496 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF2Q99496 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF2Q99496 AC139530.1-201ENST00000575312 1977 ntBASIC17.32■□□□□ 0.36
RNF2Q99496 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF2Q99496 MIR4787-201ENST00000607364 84 ntBASIC17.32■□□□□ 0.36
RNF2Q99496 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.32■□□□□ 0.36
RNF2Q99496 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF2Q99496 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF2Q99496 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF2Q99496 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF2Q99496 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF2Q99496 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF2Q99496 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF2Q99496 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF2Q99496 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF2Q99496 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RNF2Q99496 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF2Q99496 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF2Q99496 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNF2Q99496 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF2Q99496 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF2Q99496 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF2Q99496 AL035685.1-201ENST00000636663 812 ntBASIC17.31■□□□□ 0.36
RNF2Q99496 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF2Q99496 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF2Q99496 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF2Q99496 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF2Q99496 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF2Q99496 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF2Q99496 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF2Q99496 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF2Q99496 AC092028.1-203ENST00000608262 953 ntBASIC17.3■□□□□ 0.36
RNF2Q99496 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF2Q99496 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF2Q99496 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF2Q99496 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF2Q99496 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF2Q99496 AL353803.4-201ENST00000565882 1934 ntBASIC17.29■□□□□ 0.36
RNF2Q99496 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF2Q99496 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF2Q99496 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF2Q99496 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RNF2Q99496 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF2Q99496 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF2Q99496 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RNF2Q99496 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF2Q99496 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF2Q99496 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF2Q99496 AC007375.3-201ENST00000600936 2314 ntBASIC17.29■□□□□ 0.36
RNF2Q99496 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms