Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDK5RAP1Q96SZ6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDK5RAP1Q96SZ6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDK5RAP1Q96SZ6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDK5RAP1Q96SZ6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDK5RAP1Q96SZ6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDK5RAP1Q96SZ6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDK5RAP1Q96SZ6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 AC123595.1-201ENST00000440769 1046 ntBASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 LINC01960-201ENST00000563759 1884 ntBASIC22.77■■□□□ 1.24
CDK5RAP1Q96SZ6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.77■■□□□ 1.23
CDK5RAP1Q96SZ6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDK5RAP1Q96SZ6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDK5RAP1Q96SZ6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDK5RAP1Q96SZ6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 DUSP8P5-201ENST00000422884 1815 ntBASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.73■■□□□ 1.23
CDK5RAP1Q96SZ6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 MIR6084-201ENST00000622012 110 ntBASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDK5RAP1Q96SZ6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDK5RAP1Q96SZ6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDK5RAP1Q96SZ6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
CDK5RAP1Q96SZ6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CDK5RAP1Q96SZ6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDK5RAP1Q96SZ6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CDK5RAP1Q96SZ6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CDK5RAP1Q96SZ6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDK5RAP1Q96SZ6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
CDK5RAP1Q96SZ6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 AC087623.3-201ENST00000607047 1098 ntBASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 LINC02228-203ENST00000641970 1355 ntBASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.7■■□□□ 1.22
CDK5RAP1Q96SZ6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms