Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.15■■□□□ 1.3
CALR3Q96L12 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.15■■□□□ 1.3
CALR3Q96L12 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CALR3Q96L12 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CALR3Q96L12 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CALR3Q96L12 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CALR3Q96L12 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CALR3Q96L12 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.15■■□□□ 1.3
CALR3Q96L12 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CALR3Q96L12 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CALR3Q96L12 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CALR3Q96L12 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.14■■□□□ 1.3
CALR3Q96L12 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.14■■□□□ 1.29
CALR3Q96L12 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CALR3Q96L12 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.14■■□□□ 1.29
CALR3Q96L12 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.14■■□□□ 1.29
CALR3Q96L12 MTDHP2-201ENST00000601468 714 ntBASIC23.14■■□□□ 1.29
CALR3Q96L12 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.14■■□□□ 1.29
CALR3Q96L12 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.14■■□□□ 1.29
CALR3Q96L12 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CALR3Q96L12 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CALR3Q96L12 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.14■■□□□ 1.29
CALR3Q96L12 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.14■■□□□ 1.29
CALR3Q96L12 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CALR3Q96L12 AL137060.1-201ENST00000618151 2648 ntBASIC23.13■■□□□ 1.29
CALR3Q96L12 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CALR3Q96L12 C17orf82-201ENST00000623772 1530 ntBASIC23.13■■□□□ 1.29
CALR3Q96L12 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.13■■□□□ 1.29
CALR3Q96L12 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CALR3Q96L12 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CALR3Q96L12 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CALR3Q96L12 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.13■■□□□ 1.29
CALR3Q96L12 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CALR3Q96L12 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.13■■□□□ 1.29
CALR3Q96L12 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CALR3Q96L12 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CALR3Q96L12 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CALR3Q96L12 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.12■■□□□ 1.29
CALR3Q96L12 FBXW4P1-201ENST00000426721 2239 ntBASIC23.12■■□□□ 1.29
CALR3Q96L12 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.12■■□□□ 1.29
CALR3Q96L12 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.12■■□□□ 1.29
CALR3Q96L12 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CALR3Q96L12 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CALR3Q96L12 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CALR3Q96L12 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.12■■□□□ 1.29
CALR3Q96L12 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CALR3Q96L12 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.12■■□□□ 1.29
CALR3Q96L12 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CALR3Q96L12 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CALR3Q96L12 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.11■■□□□ 1.29
CALR3Q96L12 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.11■■□□□ 1.29
CALR3Q96L12 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.11■■□□□ 1.29
CALR3Q96L12 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CALR3Q96L12 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CALR3Q96L12 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CALR3Q96L12 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CALR3Q96L12 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CALR3Q96L12 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CALR3Q96L12 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
CALR3Q96L12 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CALR3Q96L12 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CALR3Q96L12 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CALR3Q96L12 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.1■■□□□ 1.29
CALR3Q96L12 AL499627.2-201ENST00000606283 725 ntBASIC23.1■■□□□ 1.29
CALR3Q96L12 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CALR3Q96L12 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CALR3Q96L12 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CALR3Q96L12 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.1■■□□□ 1.29
CALR3Q96L12 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.1■■□□□ 1.29
CALR3Q96L12 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CALR3Q96L12 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CALR3Q96L12 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
CALR3Q96L12 AC004687.1-201ENST00000579003 1625 ntBASIC23.09■■□□□ 1.29
CALR3Q96L12 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.09■■□□□ 1.29
CALR3Q96L12 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CALR3Q96L12 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.09■■□□□ 1.29
CALR3Q96L12 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CALR3Q96L12 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CALR3Q96L12 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CALR3Q96L12 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CALR3Q96L12 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CALR3Q96L12 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CALR3Q96L12 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CALR3Q96L12 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CALR3Q96L12 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
CALR3Q96L12 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.09■■□□□ 1.29
CALR3Q96L12 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.09■■□□□ 1.29
CALR3Q96L12 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CALR3Q96L12 AL024507.2-201ENST00000606070 2574 ntBASIC23.08■■□□□ 1.29
CALR3Q96L12 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CALR3Q96L12 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
CALR3Q96L12 MIR4787-201ENST00000607364 84 ntBASIC23.08■■□□□ 1.29
CALR3Q96L12 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.08■■□□□ 1.29
CALR3Q96L12 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CALR3Q96L12 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CALR3Q96L12 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CALR3Q96L12 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
CALR3Q96L12 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CALR3Q96L12 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CALR3Q96L12 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms