Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 FBXW4P1-201ENST00000426721 2239 ntBASIC20.82■□□□□ 0.92
ITCHQ96J02 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.82■□□□□ 0.92
ITCHQ96J02 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ITCHQ96J02 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.81■□□□□ 0.92
ITCHQ96J02 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ITCHQ96J02 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ITCHQ96J02 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.81■□□□□ 0.92
ITCHQ96J02 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITCHQ96J02 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITCHQ96J02 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITCHQ96J02 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITCHQ96J02 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.8■□□□□ 0.92
ITCHQ96J02 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.8■□□□□ 0.92
ITCHQ96J02 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.8■□□□□ 0.92
ITCHQ96J02 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
ITCHQ96J02 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.8■□□□□ 0.92
ITCHQ96J02 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.8■□□□□ 0.92
ITCHQ96J02 AC092028.1-203ENST00000608262 953 ntBASIC20.8■□□□□ 0.92
ITCHQ96J02 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ITCHQ96J02 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.8■□□□□ 0.92
ITCHQ96J02 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITCHQ96J02 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITCHQ96J02 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITCHQ96J02 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITCHQ96J02 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITCHQ96J02 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ITCHQ96J02 AL024507.2-201ENST00000606070 2574 ntBASIC20.8■□□□□ 0.92
ITCHQ96J02 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ITCHQ96J02 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITCHQ96J02 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITCHQ96J02 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.79■□□□□ 0.92
ITCHQ96J02 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ITCHQ96J02 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITCHQ96J02 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITCHQ96J02 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.79■□□□□ 0.92
ITCHQ96J02 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.79■□□□□ 0.92
ITCHQ96J02 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.79■□□□□ 0.92
ITCHQ96J02 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ITCHQ96J02 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITCHQ96J02 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITCHQ96J02 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ITCHQ96J02 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITCHQ96J02 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ITCHQ96J02 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.78■□□□□ 0.92
ITCHQ96J02 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITCHQ96J02 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITCHQ96J02 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ITCHQ96J02 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.78■□□□□ 0.92
ITCHQ96J02 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ITCHQ96J02 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ITCHQ96J02 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.78■□□□□ 0.92
ITCHQ96J02 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ITCHQ96J02 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ITCHQ96J02 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.78■□□□□ 0.92
ITCHQ96J02 AC009102.2-201ENST00000606772 1639 ntBASIC20.78■□□□□ 0.92
ITCHQ96J02 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ITCHQ96J02 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITCHQ96J02 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITCHQ96J02 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.77■□□□□ 0.92
ITCHQ96J02 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ITCHQ96J02 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ITCHQ96J02 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITCHQ96J02 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITCHQ96J02 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ITCHQ96J02 KRT125P-201ENST00000546827 989 ntBASIC20.77■□□□□ 0.92
ITCHQ96J02 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ITCHQ96J02 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ITCHQ96J02 AC004687.1-201ENST00000579003 1625 ntBASIC20.77■□□□□ 0.92
ITCHQ96J02 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ITCHQ96J02 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITCHQ96J02 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
ITCHQ96J02 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ITCHQ96J02 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ITCHQ96J02 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
ITCHQ96J02 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITCHQ96J02 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.76■□□□□ 0.91
ITCHQ96J02 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ITCHQ96J02 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.76■□□□□ 0.91
ITCHQ96J02 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ITCHQ96J02 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ITCHQ96J02 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITCHQ96J02 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITCHQ96J02 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.76■□□□□ 0.91
ITCHQ96J02 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.76■□□□□ 0.91
ITCHQ96J02 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ITCHQ96J02 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITCHQ96J02 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.76■□□□□ 0.91
ITCHQ96J02 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.75■□□□□ 0.91
ITCHQ96J02 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.75■□□□□ 0.91
ITCHQ96J02 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITCHQ96J02 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms