Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 AC010141.3-201ENST00000456659 717 ntBASIC18.39■□□□□ 0.53
TIMD4Q96H15 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMD4Q96H15 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TIMD4Q96H15 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.39■□□□□ 0.53
TIMD4Q96H15 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMD4Q96H15 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMD4Q96H15 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMD4Q96H15 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMD4Q96H15 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.38■□□□□ 0.53
TIMD4Q96H15 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.38■□□□□ 0.53
TIMD4Q96H15 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.38■□□□□ 0.53
TIMD4Q96H15 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMD4Q96H15 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.38■□□□□ 0.53
TIMD4Q96H15 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMD4Q96H15 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.38■□□□□ 0.53
TIMD4Q96H15 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMD4Q96H15 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 AC027612.3-201ENST00000413684 1047 ntBASIC18.37■□□□□ 0.53
TIMD4Q96H15 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.37■□□□□ 0.53
TIMD4Q96H15 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMD4Q96H15 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TIMD4Q96H15 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TIMD4Q96H15 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TIMD4Q96H15 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TIMD4Q96H15 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TIMD4Q96H15 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.36■□□□□ 0.53
TIMD4Q96H15 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.36■□□□□ 0.53
TIMD4Q96H15 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMD4Q96H15 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.35■□□□□ 0.53
TIMD4Q96H15 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMD4Q96H15 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TIMD4Q96H15 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TIMD4Q96H15 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.35■□□□□ 0.53
TIMD4Q96H15 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.35■□□□□ 0.53
TIMD4Q96H15 AC123595.1-201ENST00000440769 1046 ntBASIC18.35■□□□□ 0.53
TIMD4Q96H15 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.35■□□□□ 0.53
TIMD4Q96H15 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.35■□□□□ 0.53
TIMD4Q96H15 AC087623.3-201ENST00000607047 1098 ntBASIC18.35■□□□□ 0.53
TIMD4Q96H15 MIR6084-201ENST00000622012 110 ntBASIC18.35■□□□□ 0.53
TIMD4Q96H15 AL031602.1-201ENST00000633169 911 ntBASIC18.35■□□□□ 0.53
TIMD4Q96H15 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMD4Q96H15 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMD4Q96H15 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
TIMD4Q96H15 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMD4Q96H15 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.34■□□□□ 0.53
TIMD4Q96H15 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TIMD4Q96H15 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMD4Q96H15 AC034268.1-201ENST00000441047 882 ntBASIC18.34■□□□□ 0.53
TIMD4Q96H15 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TIMD4Q96H15 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMD4Q96H15 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMD4Q96H15 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMD4Q96H15 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMD4Q96H15 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMD4Q96H15 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMD4Q96H15 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMD4Q96H15 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TIMD4Q96H15 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TIMD4Q96H15 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TIMD4Q96H15 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMD4Q96H15 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMD4Q96H15 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TIMD4Q96H15 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.33■□□□□ 0.52
TIMD4Q96H15 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMD4Q96H15 AC104564.3-201ENST00000582367 638 ntBASIC18.33■□□□□ 0.52
TIMD4Q96H15 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMD4Q96H15 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMD4Q96H15 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.33■□□□□ 0.52
TIMD4Q96H15 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMD4Q96H15 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMD4Q96H15 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMD4Q96H15 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TIMD4Q96H15 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms