Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 TSPY9P-201ENST00000440215 945 ntBASIC21.72■■□□□ 1.07
PTCD3Q96EY7 TSPY11P-201ENST00000442607 1045 ntBASIC21.72■■□□□ 1.07
PTCD3Q96EY7 AC010997.5-201ENST00000609182 354 ntBASIC21.72■■□□□ 1.07
PTCD3Q96EY7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
PTCD3Q96EY7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCD3Q96EY7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD3Q96EY7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.71■■□□□ 1.07
PTCD3Q96EY7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD3Q96EY7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD3Q96EY7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD3Q96EY7 AC073130.3-201ENST00000624389 2278 ntBASIC21.71■■□□□ 1.07
PTCD3Q96EY7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.7■■□□□ 1.07
PTCD3Q96EY7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.7■■□□□ 1.06
PTCD3Q96EY7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD3Q96EY7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.69■■□□□ 1.06
PTCD3Q96EY7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD3Q96EY7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 UNC93B8-201ENST00000511903 705 ntBASIC21.67■■□□□ 1.06
PTCD3Q96EY7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD3Q96EY7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
PTCD3Q96EY7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms