Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBGCP3Q96CW5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBGCP3Q96CW5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.23■□□□□ 0.99
TUBGCP3Q96CW5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 DUX4L4-201ENST00000566884 1269 ntBASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBGCP3Q96CW5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 AL137060.1-201ENST00000618151 2648 ntBASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBGCP3Q96CW5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
TUBGCP3Q96CW5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBGCP3Q96CW5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TUBGCP3Q96CW5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBGCP3Q96CW5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.2■□□□□ 0.98
TUBGCP3Q96CW5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBGCP3Q96CW5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBGCP3Q96CW5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.2■□□□□ 0.98
TUBGCP3Q96CW5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBGCP3Q96CW5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBGCP3Q96CW5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBGCP3Q96CW5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.17■□□□□ 0.98
TUBGCP3Q96CW5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 AC092028.1-203ENST00000608262 953 ntBASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBGCP3Q96CW5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBGCP3Q96CW5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms