Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
APH1AQ96BI3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.39■□□□□ 0.69
APH1AQ96BI3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APH1AQ96BI3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.39■□□□□ 0.69
APH1AQ96BI3 LINC01960-201ENST00000563759 1884 ntBASIC19.39■□□□□ 0.69
APH1AQ96BI3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APH1AQ96BI3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.38■□□□□ 0.69
APH1AQ96BI3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APH1AQ96BI3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
APH1AQ96BI3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.38■□□□□ 0.69
APH1AQ96BI3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
APH1AQ96BI3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APH1AQ96BI3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.38■□□□□ 0.69
APH1AQ96BI3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
APH1AQ96BI3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.38■□□□□ 0.69
APH1AQ96BI3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.38■□□□□ 0.69
APH1AQ96BI3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APH1AQ96BI3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APH1AQ96BI3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
APH1AQ96BI3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APH1AQ96BI3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.37■□□□□ 0.69
APH1AQ96BI3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.37■□□□□ 0.69
APH1AQ96BI3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APH1AQ96BI3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APH1AQ96BI3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
APH1AQ96BI3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APH1AQ96BI3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APH1AQ96BI3 ZNRF2P3-201ENST00000424200 374 ntBASIC19.36■□□□□ 0.69
APH1AQ96BI3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APH1AQ96BI3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.36■□□□□ 0.69
APH1AQ96BI3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APH1AQ96BI3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.35■□□□□ 0.69
APH1AQ96BI3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
APH1AQ96BI3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
APH1AQ96BI3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APH1AQ96BI3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
APH1AQ96BI3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APH1AQ96BI3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
APH1AQ96BI3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.35■□□□□ 0.69
APH1AQ96BI3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.35■□□□□ 0.69
APH1AQ96BI3 AC010141.3-201ENST00000456659 717 ntBASIC19.35■□□□□ 0.69
APH1AQ96BI3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
APH1AQ96BI3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.35■□□□□ 0.69
APH1AQ96BI3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.35■□□□□ 0.69
APH1AQ96BI3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
APH1AQ96BI3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
APH1AQ96BI3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APH1AQ96BI3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APH1AQ96BI3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APH1AQ96BI3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APH1AQ96BI3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
APH1AQ96BI3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
APH1AQ96BI3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.34■□□□□ 0.69
APH1AQ96BI3 IRS3P-201ENST00000223076 1006 ntBASIC19.34■□□□□ 0.69
APH1AQ96BI3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.34■□□□□ 0.69
APH1AQ96BI3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
APH1AQ96BI3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
APH1AQ96BI3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APH1AQ96BI3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APH1AQ96BI3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
APH1AQ96BI3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
APH1AQ96BI3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.34■□□□□ 0.69
APH1AQ96BI3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
APH1AQ96BI3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
APH1AQ96BI3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.33■□□□□ 0.68
APH1AQ96BI3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.33■□□□□ 0.68
APH1AQ96BI3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APH1AQ96BI3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
APH1AQ96BI3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APH1AQ96BI3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.32■□□□□ 0.68
APH1AQ96BI3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APH1AQ96BI3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.32■□□□□ 0.68
APH1AQ96BI3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APH1AQ96BI3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
APH1AQ96BI3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
APH1AQ96BI3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
APH1AQ96BI3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APH1AQ96BI3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
APH1AQ96BI3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APH1AQ96BI3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.32■□□□□ 0.68
APH1AQ96BI3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.32■□□□□ 0.68
APH1AQ96BI3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.32■□□□□ 0.68
APH1AQ96BI3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.32■□□□□ 0.68
APH1AQ96BI3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
APH1AQ96BI3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APH1AQ96BI3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
APH1AQ96BI3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
APH1AQ96BI3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.31■□□□□ 0.68
APH1AQ96BI3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APH1AQ96BI3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms