Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LINC00116Q8NCU8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LINC00116Q8NCU8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
LINC00116Q8NCU8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LINC00116Q8NCU8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.16■■■□□ 2.1
LINC00116Q8NCU8 GUSBP6-202ENST00000438529 1198 ntBASIC28.16■■■□□ 2.1
LINC00116Q8NCU8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LINC00116Q8NCU8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LINC00116Q8NCU8 AC138932.3-201ENST00000567634 1902 ntBASIC28.16■■■□□ 2.1
LINC00116Q8NCU8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
LINC00116Q8NCU8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 AC079630.1-202ENST00000618127 1840 ntBASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
LINC00116Q8NCU8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
LINC00116Q8NCU8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
LINC00116Q8NCU8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
LINC00116Q8NCU8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
LINC00116Q8NCU8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.13■■■□□ 2.09
LINC00116Q8NCU8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
LINC00116Q8NCU8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC28.13■■■□□ 2.09
LINC00116Q8NCU8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
LINC00116Q8NCU8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
LINC00116Q8NCU8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
LINC00116Q8NCU8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
LINC00116Q8NCU8 TSPY6P-201ENST00000448518 926 ntBASIC28.12■■■□□ 2.09
LINC00116Q8NCU8 AC083906.2-201ENST00000511578 360 ntBASIC28.12■■■□□ 2.09
LINC00116Q8NCU8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.12■■■□□ 2.09
LINC00116Q8NCU8 AL121832.2-201ENST00000610979 668 ntBASIC28.12■■■□□ 2.09
LINC00116Q8NCU8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.11■■■□□ 2.09
LINC00116Q8NCU8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.1■■■□□ 2.09
LINC00116Q8NCU8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.1■■■□□ 2.09
LINC00116Q8NCU8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.1■■■□□ 2.09
LINC00116Q8NCU8 SLC7A5P2-201ENST00000553010 536 ntBASIC28.1■■■□□ 2.09
LINC00116Q8NCU8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.1■■■□□ 2.09
LINC00116Q8NCU8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
LINC00116Q8NCU8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
LINC00116Q8NCU8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 DUX4L16-201ENST00000555130 1264 ntBASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 KRT18P6-201ENST00000555540 1265 ntBASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 AL138781.1-201ENST00000566567 1274 ntBASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 AC104187.1-201ENST00000607510 612 ntBASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 AC087239.1-201ENST00000622671 572 ntBASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
LINC00116Q8NCU8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.08■■■□□ 2.09
LINC00116Q8NCU8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC28.08■■■□□ 2.09
LINC00116Q8NCU8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
LINC00116Q8NCU8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
LINC00116Q8NCU8 OXCT2P1-201ENST00000447263 1535 ntBASIC28.08■■■□□ 2.08
LINC00116Q8NCU8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.08■■■□□ 2.08
LINC00116Q8NCU8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
LINC00116Q8NCU8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 MIR4651-201ENST00000582622 73 ntBASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
LINC00116Q8NCU8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
LINC00116Q8NCU8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms