Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ZNF561Q8N587 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF561Q8N587 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF561Q8N587 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF561Q8N587 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF561Q8N587 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.56■□□□□ 0.56
ZNF561Q8N587 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF561Q8N587 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF561Q8N587 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF561Q8N587 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF561Q8N587 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF561Q8N587 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
ZNF561Q8N587 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF561Q8N587 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF561Q8N587 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.55■□□□□ 0.56
ZNF561Q8N587 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF561Q8N587 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF561Q8N587 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF561Q8N587 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF561Q8N587 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF561Q8N587 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF561Q8N587 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF561Q8N587 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF561Q8N587 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF561Q8N587 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF561Q8N587 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ZNF561Q8N587 AC131281.2-201ENST00000520478 145 ntBASIC18.54■□□□□ 0.56
ZNF561Q8N587 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ZNF561Q8N587 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF561Q8N587 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF561Q8N587 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF561Q8N587 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF561Q8N587 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF561Q8N587 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF561Q8N587 AC099791.2-201ENST00000605725 427 ntBASIC18.53■□□□□ 0.56
ZNF561Q8N587 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF561Q8N587 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF561Q8N587 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
ZNF561Q8N587 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF561Q8N587 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF561Q8N587 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF561Q8N587 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF561Q8N587 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF561Q8N587 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF561Q8N587 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF561Q8N587 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.52■□□□□ 0.56
ZNF561Q8N587 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.52■□□□□ 0.56
ZNF561Q8N587 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF561Q8N587 MIR4466-201ENST00000606121 54 ntBASIC18.52■□□□□ 0.56
ZNF561Q8N587 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF561Q8N587 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
ZNF561Q8N587 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.52■□□□□ 0.55
ZNF561Q8N587 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF561Q8N587 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF561Q8N587 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 DUX4L19-201ENST00000557448 1267 ntBASIC18.51■□□□□ 0.55
ZNF561Q8N587 AL499627.2-201ENST00000606283 725 ntBASIC18.51■□□□□ 0.55
ZNF561Q8N587 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
ZNF561Q8N587 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF561Q8N587 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF561Q8N587 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF561Q8N587 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ZNF561Q8N587 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF561Q8N587 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF561Q8N587 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF561Q8N587 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF561Q8N587 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ZNF561Q8N587 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF561Q8N587 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.5■□□□□ 0.55
ZNF561Q8N587 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
ZNF561Q8N587 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF561Q8N587 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms