Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TTC39CQ8N584 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.33■■□□□ 1.33
TTC39CQ8N584 AC087742.1-201ENST00000575880 1738 ntBASIC23.33■■□□□ 1.32
TTC39CQ8N584 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
TTC39CQ8N584 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39CQ8N584 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.32■■□□□ 1.32
TTC39CQ8N584 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TTC39CQ8N584 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39CQ8N584 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
TTC39CQ8N584 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39CQ8N584 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.32■■□□□ 1.32
TTC39CQ8N584 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.32■■□□□ 1.32
TTC39CQ8N584 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
TTC39CQ8N584 AC127496.7-201ENST00000625110 1798 ntBASIC23.32■■□□□ 1.32
TTC39CQ8N584 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
TTC39CQ8N584 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39CQ8N584 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39CQ8N584 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39CQ8N584 C9orf163-202ENST00000624034 2573 ntBASIC23.31■■□□□ 1.32
TTC39CQ8N584 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.31■■□□□ 1.32
TTC39CQ8N584 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39CQ8N584 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39CQ8N584 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39CQ8N584 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.31■■□□□ 1.32
TTC39CQ8N584 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TTC39CQ8N584 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39CQ8N584 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.31■■□□□ 1.32
TTC39CQ8N584 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
TTC39CQ8N584 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.31■■□□□ 1.32
TTC39CQ8N584 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39CQ8N584 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39CQ8N584 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TTC39CQ8N584 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
TTC39CQ8N584 C1orf229-201ENST00000623686 2258 ntBASIC23.3■■□□□ 1.32
TTC39CQ8N584 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39CQ8N584 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39CQ8N584 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39CQ8N584 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.3■■□□□ 1.32
TTC39CQ8N584 IGHV3-19-201ENST00000521488 291 ntBASIC23.3■■□□□ 1.32
TTC39CQ8N584 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39CQ8N584 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39CQ8N584 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.3■■□□□ 1.32
TTC39CQ8N584 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39CQ8N584 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.29■■□□□ 1.32
TTC39CQ8N584 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.29■■□□□ 1.32
TTC39CQ8N584 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.29■■□□□ 1.32
TTC39CQ8N584 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.29■■□□□ 1.32
TTC39CQ8N584 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.29■■□□□ 1.32
TTC39CQ8N584 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
TTC39CQ8N584 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TTC39CQ8N584 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TTC39CQ8N584 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39CQ8N584 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39CQ8N584 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39CQ8N584 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TTC39CQ8N584 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39CQ8N584 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39CQ8N584 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.28■■□□□ 1.32
TTC39CQ8N584 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39CQ8N584 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39CQ8N584 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39CQ8N584 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39CQ8N584 OXCT2P1-201ENST00000447263 1535 ntBASIC23.28■■□□□ 1.32
TTC39CQ8N584 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39CQ8N584 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TTC39CQ8N584 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.27■■□□□ 1.32
TTC39CQ8N584 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.27■■□□□ 1.32
TTC39CQ8N584 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TTC39CQ8N584 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC39CQ8N584 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TTC39CQ8N584 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC39CQ8N584 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.27■■□□□ 1.32
TTC39CQ8N584 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC39CQ8N584 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC39CQ8N584 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.27■■□□□ 1.32
TTC39CQ8N584 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC39CQ8N584 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TTC39CQ8N584 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC39CQ8N584 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC39CQ8N584 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.26■■□□□ 1.31
TTC39CQ8N584 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC39CQ8N584 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TTC39CQ8N584 AC079089.2-201ENST00000531211 1277 ntBASIC23.26■■□□□ 1.31
TTC39CQ8N584 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.26■■□□□ 1.31
TTC39CQ8N584 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC39CQ8N584 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC39CQ8N584 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC39CQ8N584 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC39CQ8N584 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.25■■□□□ 1.31
TTC39CQ8N584 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms