Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
ABCA6Q8N139 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
ABCA6Q8N139 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
ABCA6Q8N139 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC33.03■■■□□ 2.88
ABCA6Q8N139 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
ABCA6Q8N139 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
ABCA6Q8N139 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC33.02■■■□□ 2.88
ABCA6Q8N139 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
ABCA6Q8N139 AC005181.1-201ENST00000604782 1256 ntBASIC33.02■■■□□ 2.88
ABCA6Q8N139 AC068587.7-201ENST00000641602 218 ntBASIC33.02■■■□□ 2.88
ABCA6Q8N139 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC33.02■■■□□ 2.88
ABCA6Q8N139 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
ABCA6Q8N139 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
ABCA6Q8N139 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC33.02■■■□□ 2.88
ABCA6Q8N139 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ABCA6Q8N139 CNN2P6-201ENST00000439038 900 ntBASIC33.01■■■□□ 2.87
ABCA6Q8N139 AC083906.2-201ENST00000511578 360 ntBASIC33.01■■■□□ 2.87
ABCA6Q8N139 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC33■■■□□ 2.87
ABCA6Q8N139 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC33■■■□□ 2.87
ABCA6Q8N139 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
ABCA6Q8N139 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
ABCA6Q8N139 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC33■■■□□ 2.87
ABCA6Q8N139 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC32.99■■■□□ 2.87
ABCA6Q8N139 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC32.99■■■□□ 2.87
ABCA6Q8N139 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
ABCA6Q8N139 DET1-205ENST00000558413 583 ntTSL 4 BASIC32.99■■■□□ 2.87
ABCA6Q8N139 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC32.99■■■□□ 2.87
ABCA6Q8N139 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC32.99■■■□□ 2.87
ABCA6Q8N139 AC010141.3-201ENST00000456659 717 ntBASIC32.99■■■□□ 2.87
ABCA6Q8N139 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC32.99■■■□□ 2.87
ABCA6Q8N139 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC32.99■■■□□ 2.87
ABCA6Q8N139 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC32.98■■■□□ 2.87
ABCA6Q8N139 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
ABCA6Q8N139 UQCRFS1P1-201ENST00000435169 820 ntBASIC32.98■■■□□ 2.87
ABCA6Q8N139 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC32.98■■■□□ 2.87
ABCA6Q8N139 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC32.98■■■□□ 2.87
ABCA6Q8N139 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
ABCA6Q8N139 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC32.97■■■□□ 2.87
ABCA6Q8N139 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC32.97■■■□□ 2.87
ABCA6Q8N139 AC087239.1-201ENST00000622671 572 ntBASIC32.97■■■□□ 2.87
ABCA6Q8N139 MYCNOS-205ENST00000641950 531 ntBASIC32.97■■■□□ 2.87
ABCA6Q8N139 AC135731.1-201ENST00000569415 2548 ntBASIC32.97■■■□□ 2.87
ABCA6Q8N139 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC32.96■■■□□ 2.87
ABCA6Q8N139 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC32.96■■■□□ 2.87
ABCA6Q8N139 PARP1-202ENST00000366792 553 ntTSL 3 BASIC32.95■■■□□ 2.87
ABCA6Q8N139 SLC29A4P1-201ENST00000398760 971 ntBASIC32.95■■■□□ 2.87
ABCA6Q8N139 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
ABCA6Q8N139 AC008687.6-201ENST00000596318 630 ntBASIC32.95■■■□□ 2.87
ABCA6Q8N139 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC32.95■■■□□ 2.87
ABCA6Q8N139 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
ABCA6Q8N139 AC005224.4-201ENST00000583262 1652 ntBASIC32.95■■■□□ 2.87
ABCA6Q8N139 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
ABCA6Q8N139 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC32.95■■■□□ 2.86
ABCA6Q8N139 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC32.95■■■□□ 2.86
ABCA6Q8N139 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
ABCA6Q8N139 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
ABCA6Q8N139 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
ABCA6Q8N139 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
ABCA6Q8N139 AC079630.1-202ENST00000618127 1840 ntBASIC32.94■■■□□ 2.86
ABCA6Q8N139 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC32.94■■■□□ 2.86
ABCA6Q8N139 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC32.94■■■□□ 2.86
ABCA6Q8N139 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC32.94■■■□□ 2.86
ABCA6Q8N139 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC32.94■■■□□ 2.86
ABCA6Q8N139 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC32.92■■■□□ 2.86
ABCA6Q8N139 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
ABCA6Q8N139 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC32.92■■■□□ 2.86
ABCA6Q8N139 AC007322.1-201ENST00000426983 750 ntBASIC32.92■■■□□ 2.86
ABCA6Q8N139 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC32.92■■■□□ 2.86
ABCA6Q8N139 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
ABCA6Q8N139 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
ABCA6Q8N139 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
ABCA6Q8N139 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC32.91■■■□□ 2.86
ABCA6Q8N139 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC32.91■■■□□ 2.86
ABCA6Q8N139 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
ABCA6Q8N139 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC32.91■■■□□ 2.86
ABCA6Q8N139 AP003733.4-201ENST00000623785 1697 ntBASIC32.91■■■□□ 2.86
ABCA6Q8N139 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
ABCA6Q8N139 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
ABCA6Q8N139 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
ABCA6Q8N139 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC32.91■■■□□ 2.86
ABCA6Q8N139 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
ABCA6Q8N139 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC32.9■■■□□ 2.86
ABCA6Q8N139 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
ABCA6Q8N139 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
ABCA6Q8N139 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC32.9■■■□□ 2.86
ABCA6Q8N139 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
ABCA6Q8N139 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC32.9■■■□□ 2.86
ABCA6Q8N139 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
ABCA6Q8N139 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
ABCA6Q8N139 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
ABCA6Q8N139 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
ABCA6Q8N139 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
ABCA6Q8N139 RGMA-211ENST00000557420 989 ntTSL 3 BASIC32.89■■■□□ 2.86
ABCA6Q8N139 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
ABCA6Q8N139 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
ABCA6Q8N139 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
ABCA6Q8N139 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
ABCA6Q8N139 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
ABCA6Q8N139 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC32.89■■■□□ 2.86
ABCA6Q8N139 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms