Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 AC090192.1-201ENST00000517740 490 ntBASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 BX005040.4-201ENST00000637145 1518 ntBASIC17.72■□□□□ 0.43
C9orf139Q6ZV77 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf139Q6ZV77 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
C9orf139Q6ZV77 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
C9orf139Q6ZV77 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
C9orf139Q6ZV77 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
C9orf139Q6ZV77 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf139Q6ZV77 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf139Q6ZV77 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf139Q6ZV77 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.69■□□□□ 0.42
C9orf139Q6ZV77 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf139Q6ZV77 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.69■□□□□ 0.42
C9orf139Q6ZV77 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf139Q6ZV77 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf139Q6ZV77 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf139Q6ZV77 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf139Q6ZV77 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 SMUG1P1-201ENST00000590640 811 ntBASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.68■□□□□ 0.42
C9orf139Q6ZV77 OXCT2P1-201ENST00000447263 1535 ntBASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 AC004911.1-201ENST00000416316 871 ntBASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms