Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 KRT16P3-201ENST00000439127 1283 ntBASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 UNC93B8-201ENST00000511903 705 ntBASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM53Q6P2H8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEM53Q6P2H8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM53Q6P2H8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.85■□□□□ 0.77
TMEM53Q6P2H8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 MIR6724-1-201ENST00000616420 92 ntBASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 MIR6724-2-201ENST00000616483 92 ntBASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 MIR6724-4-201ENST00000617390 92 ntBASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 MIR6724-3-201ENST00000622482 92 ntBASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM53Q6P2H8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.83■□□□□ 0.77
TMEM53Q6P2H8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.83■□□□□ 0.76
TMEM53Q6P2H8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM53Q6P2H8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms