Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDCD4Q53EL6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDCD4Q53EL6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PDCD4Q53EL6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDCD4Q53EL6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.02■□□□□ 0.96
PDCD4Q53EL6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.02■□□□□ 0.96
PDCD4Q53EL6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDCD4Q53EL6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDCD4Q53EL6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PDCD4Q53EL6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PDCD4Q53EL6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDCD4Q53EL6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21■□□□□ 0.95
PDCD4Q53EL6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21■□□□□ 0.95
PDCD4Q53EL6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDCD4Q53EL6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21■□□□□ 0.95
PDCD4Q53EL6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDCD4Q53EL6 AL137060.1-201ENST00000618151 2648 ntBASIC21■□□□□ 0.95
PDCD4Q53EL6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21■□□□□ 0.95
PDCD4Q53EL6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDCD4Q53EL6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21■□□□□ 0.95
PDCD4Q53EL6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21■□□□□ 0.95
PDCD4Q53EL6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21■□□□□ 0.95
PDCD4Q53EL6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21■□□□□ 0.95
PDCD4Q53EL6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21■□□□□ 0.95
PDCD4Q53EL6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDCD4Q53EL6 AC010542.4-201ENST00000563151 1910 ntBASIC21■□□□□ 0.95
PDCD4Q53EL6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.99■□□□□ 0.95
PDCD4Q53EL6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.98■□□□□ 0.95
PDCD4Q53EL6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
PDCD4Q53EL6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDCD4Q53EL6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDCD4Q53EL6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.98■□□□□ 0.95
PDCD4Q53EL6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDCD4Q53EL6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDCD4Q53EL6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.98■□□□□ 0.95
PDCD4Q53EL6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.97■□□□□ 0.95
PDCD4Q53EL6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDCD4Q53EL6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDCD4Q53EL6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDCD4Q53EL6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.97■□□□□ 0.95
PDCD4Q53EL6 CA15P2-201ENST00000611168 834 ntBASIC20.97■□□□□ 0.95
PDCD4Q53EL6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDCD4Q53EL6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.97■□□□□ 0.95
PDCD4Q53EL6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.96■□□□□ 0.95
PDCD4Q53EL6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.96■□□□□ 0.95
PDCD4Q53EL6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.96■□□□□ 0.95
PDCD4Q53EL6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDCD4Q53EL6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDCD4Q53EL6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.96■□□□□ 0.95
PDCD4Q53EL6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDCD4Q53EL6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDCD4Q53EL6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.96■□□□□ 0.95
PDCD4Q53EL6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDCD4Q53EL6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDCD4Q53EL6 FAM99A-202ENST00000538190 1989 ntBASIC20.96■□□□□ 0.95
PDCD4Q53EL6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PDCD4Q53EL6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 BX664725.1-201ENST00000438252 379 ntBASIC20.95■□□□□ 0.94
PDCD4Q53EL6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDCD4Q53EL6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.94■□□□□ 0.94
PDCD4Q53EL6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDCD4Q53EL6 AC004687.1-201ENST00000579003 1625 ntBASIC20.94■□□□□ 0.94
PDCD4Q53EL6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDCD4Q53EL6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.94■□□□□ 0.94
PDCD4Q53EL6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.94■□□□□ 0.94
PDCD4Q53EL6 AC026310.3-201ENST00000625186 2373 ntBASIC20.94■□□□□ 0.94
PDCD4Q53EL6 AC009102.2-201ENST00000606772 1639 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms