Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RFX7Q2KHR2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.65■■□□□ 1.86
RFX7Q2KHR2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RFX7Q2KHR2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
RFX7Q2KHR2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RFX7Q2KHR2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.65■■□□□ 1.86
RFX7Q2KHR2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.65■■□□□ 1.86
RFX7Q2KHR2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.65■■□□□ 1.86
RFX7Q2KHR2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
RFX7Q2KHR2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.64■■□□□ 1.86
RFX7Q2KHR2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
RFX7Q2KHR2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RFX7Q2KHR2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
RFX7Q2KHR2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.64■■□□□ 1.86
RFX7Q2KHR2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RFX7Q2KHR2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.85
RFX7Q2KHR2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
RFX7Q2KHR2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.63■■□□□ 1.85
RFX7Q2KHR2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RFX7Q2KHR2 MIR572-201ENST00000384983 95 ntBASIC26.62■■□□□ 1.85
RFX7Q2KHR2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
RFX7Q2KHR2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.62■■□□□ 1.85
RFX7Q2KHR2 AC012414.1-201ENST00000556676 535 ntBASIC26.62■■□□□ 1.85
RFX7Q2KHR2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.62■■□□□ 1.85
RFX7Q2KHR2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RFX7Q2KHR2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
RFX7Q2KHR2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RFX7Q2KHR2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RFX7Q2KHR2 ESRRAP2-201ENST00000418437 1549 ntBASIC26.61■■□□□ 1.85
RFX7Q2KHR2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.61■■□□□ 1.85
RFX7Q2KHR2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RFX7Q2KHR2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RFX7Q2KHR2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
RFX7Q2KHR2 DUX4L2-201ENST00000561772 1275 ntBASIC26.6■■□□□ 1.85
RFX7Q2KHR2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.6■■□□□ 1.85
RFX7Q2KHR2 DUX4L6-201ENST00000626483 1275 ntBASIC26.6■■□□□ 1.85
RFX7Q2KHR2 DUX4L1-201ENST00000627662 1275 ntBASIC26.6■■□□□ 1.85
RFX7Q2KHR2 DUX4L8-201ENST00000629013 1275 ntBASIC26.6■■□□□ 1.85
RFX7Q2KHR2 DUX4L3-201ENST00000630187 1275 ntBASIC26.6■■□□□ 1.85
RFX7Q2KHR2 DUX4L7-201ENST00000630678 1275 ntBASIC26.6■■□□□ 1.85
RFX7Q2KHR2 DUX4L5-201ENST00000630834 1275 ntBASIC26.6■■□□□ 1.85
RFX7Q2KHR2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RFX7Q2KHR2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.6■■□□□ 1.85
RFX7Q2KHR2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RFX7Q2KHR2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RFX7Q2KHR2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
RFX7Q2KHR2 LINC01960-201ENST00000563759 1884 ntBASIC26.6■■□□□ 1.85
RFX7Q2KHR2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 AL358852.1-201ENST00000623174 1268 ntBASIC26.59■■□□□ 1.85
RFX7Q2KHR2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 C1orf229-201ENST00000623686 2258 ntBASIC26.59■■□□□ 1.85
RFX7Q2KHR2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RFX7Q2KHR2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 AC127496.7-201ENST00000625110 1798 ntBASIC26.58■■□□□ 1.85
RFX7Q2KHR2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.58■■□□□ 1.85
RFX7Q2KHR2 AC034268.1-201ENST00000441047 882 ntBASIC26.58■■□□□ 1.84
RFX7Q2KHR2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms