Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCS1Q01581 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HMGCS1Q01581 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGCS1Q01581 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCS1Q01581 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.1■□□□□ 0.97
HMGCS1Q01581 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCS1Q01581 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HMGCS1Q01581 C11orf96-202ENST00000528572 1834 ntBASIC21.1■□□□□ 0.97
HMGCS1Q01581 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCS1Q01581 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCS1Q01581 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCS1Q01581 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCS1Q01581 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCS1Q01581 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HMGCS1Q01581 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCS1Q01581 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCS1Q01581 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
HMGCS1Q01581 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCS1Q01581 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCS1Q01581 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.09■□□□□ 0.97
HMGCS1Q01581 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCS1Q01581 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCS1Q01581 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCS1Q01581 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.08■□□□□ 0.97
HMGCS1Q01581 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
HMGCS1Q01581 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCS1Q01581 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCS1Q01581 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HMGCS1Q01581 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
HMGCS1Q01581 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCS1Q01581 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCS1Q01581 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
HMGCS1Q01581 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGCS1Q01581 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGCS1Q01581 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGCS1Q01581 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.08■□□□□ 0.96
HMGCS1Q01581 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.08■□□□□ 0.96
HMGCS1Q01581 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.08■□□□□ 0.96
HMGCS1Q01581 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.08■□□□□ 0.96
HMGCS1Q01581 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGCS1Q01581 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
HMGCS1Q01581 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGCS1Q01581 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGCS1Q01581 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
HMGCS1Q01581 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGCS1Q01581 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGCS1Q01581 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.07■□□□□ 0.96
HMGCS1Q01581 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.07■□□□□ 0.96
HMGCS1Q01581 AC137767.1-201ENST00000602918 1920 ntBASIC21.07■□□□□ 0.96
HMGCS1Q01581 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCS1Q01581 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.06■□□□□ 0.96
HMGCS1Q01581 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS1Q01581 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HMGCS1Q01581 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS1Q01581 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS1Q01581 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS1Q01581 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HMGCS1Q01581 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS1Q01581 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS1Q01581 AL499627.2-201ENST00000606283 725 ntBASIC21.05■□□□□ 0.96
HMGCS1Q01581 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
HMGCS1Q01581 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCS1Q01581 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.05■□□□□ 0.96
HMGCS1Q01581 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS1Q01581 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.04■□□□□ 0.96
HMGCS1Q01581 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.04■□□□□ 0.96
HMGCS1Q01581 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS1Q01581 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.04■□□□□ 0.96
HMGCS1Q01581 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS1Q01581 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS1Q01581 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS1Q01581 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.04■□□□□ 0.96
HMGCS1Q01581 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS1Q01581 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS1Q01581 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
HMGCS1Q01581 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS1Q01581 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS1Q01581 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS1Q01581 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS1Q01581 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.03■□□□□ 0.96
HMGCS1Q01581 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.03■□□□□ 0.96
HMGCS1Q01581 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS1Q01581 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS1Q01581 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.03■□□□□ 0.96
HMGCS1Q01581 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS1Q01581 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS1Q01581 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS1Q01581 AC006455.2-201ENST00000429931 906 ntBASIC21.02■□□□□ 0.96
HMGCS1Q01581 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS1Q01581 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS1Q01581 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms