Protein–RNA interactions for Protein: P98066

TNFAIP6, Tumor necrosis factor-inducible gene 6 protein, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP6P98066 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFAIP6P98066 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
TNFAIP6P98066 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TNFAIP6P98066 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFAIP6P98066 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.59■□□□□ 0.57
TNFAIP6P98066 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TNFAIP6P98066 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TNFAIP6P98066 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TNFAIP6P98066 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFAIP6P98066 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFAIP6P98066 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFAIP6P98066 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.58■□□□□ 0.57
TNFAIP6P98066 LINC01960-201ENST00000563759 1884 ntBASIC18.58■□□□□ 0.57
TNFAIP6P98066 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFAIP6P98066 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.58■□□□□ 0.57
TNFAIP6P98066 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
TNFAIP6P98066 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.58■□□□□ 0.56
TNFAIP6P98066 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.58■□□□□ 0.56
TNFAIP6P98066 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.58■□□□□ 0.56
TNFAIP6P98066 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.58■□□□□ 0.56
TNFAIP6P98066 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.58■□□□□ 0.56
TNFAIP6P98066 AL031602.1-201ENST00000633169 911 ntBASIC18.58■□□□□ 0.56
TNFAIP6P98066 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TNFAIP6P98066 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFAIP6P98066 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFAIP6P98066 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFAIP6P98066 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFAIP6P98066 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
TNFAIP6P98066 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFAIP6P98066 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFAIP6P98066 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFAIP6P98066 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFAIP6P98066 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFAIP6P98066 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFAIP6P98066 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFAIP6P98066 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFAIP6P98066 ZNRF2P3-201ENST00000424200 374 ntBASIC18.56■□□□□ 0.56
TNFAIP6P98066 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.56■□□□□ 0.56
TNFAIP6P98066 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFAIP6P98066 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFAIP6P98066 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFAIP6P98066 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFAIP6P98066 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFAIP6P98066 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TNFAIP6P98066 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFAIP6P98066 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFAIP6P98066 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
TNFAIP6P98066 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFAIP6P98066 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFAIP6P98066 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFAIP6P98066 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TNFAIP6P98066 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFAIP6P98066 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
TNFAIP6P98066 AC010141.3-201ENST00000456659 717 ntBASIC18.55■□□□□ 0.56
TNFAIP6P98066 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFAIP6P98066 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
TNFAIP6P98066 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFAIP6P98066 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFAIP6P98066 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TNFAIP6P98066 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFAIP6P98066 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFAIP6P98066 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFAIP6P98066 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
TNFAIP6P98066 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFAIP6P98066 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNFAIP6P98066 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFAIP6P98066 IRS3P-201ENST00000223076 1006 ntBASIC18.54■□□□□ 0.56
TNFAIP6P98066 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFAIP6P98066 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.54■□□□□ 0.56
TNFAIP6P98066 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.54■□□□□ 0.56
TNFAIP6P98066 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFAIP6P98066 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.54■□□□□ 0.56
TNFAIP6P98066 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFAIP6P98066 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFAIP6P98066 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.54■□□□□ 0.56
TNFAIP6P98066 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFAIP6P98066 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFAIP6P98066 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TNFAIP6P98066 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFAIP6P98066 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms