Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOC4P55056 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOC4P55056 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.06■□□□□ 0.16
APOC4P55056 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.06■□□□□ 0.16
APOC4P55056 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.06■□□□□ 0.16
APOC4P55056 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
APOC4P55056 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.06■□□□□ 0.16
APOC4P55056 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.06■□□□□ 0.16
APOC4P55056 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOC4P55056 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOC4P55056 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.06■□□□□ 0.16
APOC4P55056 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.06■□□□□ 0.16
APOC4P55056 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOC4P55056 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
APOC4P55056 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOC4P55056 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOC4P55056 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
APOC4P55056 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOC4P55056 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOC4P55056 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.05■□□□□ 0.16
APOC4P55056 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOC4P55056 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.05■□□□□ 0.16
APOC4P55056 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOC4P55056 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.05■□□□□ 0.16
APOC4P55056 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.05■□□□□ 0.16
APOC4P55056 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.05■□□□□ 0.16
APOC4P55056 AC123595.1-201ENST00000440769 1046 ntBASIC16.05■□□□□ 0.16
APOC4P55056 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.05■□□□□ 0.16
APOC4P55056 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.05■□□□□ 0.16
APOC4P55056 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.05■□□□□ 0.16
APOC4P55056 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
APOC4P55056 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.05■□□□□ 0.16
APOC4P55056 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
APOC4P55056 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.05■□□□□ 0.16
APOC4P55056 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.04■□□□□ 0.16
APOC4P55056 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.04■□□□□ 0.16
APOC4P55056 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
APOC4P55056 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APOC4P55056 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
APOC4P55056 AC034268.1-201ENST00000441047 882 ntBASIC16.04■□□□□ 0.16
APOC4P55056 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.04■□□□□ 0.16
APOC4P55056 AC104564.3-201ENST00000582367 638 ntBASIC16.04■□□□□ 0.16
APOC4P55056 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.04■□□□□ 0.16
APOC4P55056 AL031602.1-201ENST00000633169 911 ntBASIC16.04■□□□□ 0.16
APOC4P55056 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.04■□□□□ 0.16
APOC4P55056 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
APOC4P55056 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APOC4P55056 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.03■□□□□ 0.16
APOC4P55056 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOC4P55056 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APOC4P55056 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOC4P55056 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
APOC4P55056 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APOC4P55056 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOC4P55056 AC087623.3-201ENST00000607047 1098 ntBASIC16.03■□□□□ 0.16
APOC4P55056 MIR6084-201ENST00000622012 110 ntBASIC16.03■□□□□ 0.16
APOC4P55056 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.03■□□□□ 0.16
APOC4P55056 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOC4P55056 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.03■□□□□ 0.16
APOC4P55056 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOC4P55056 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.02■□□□□ 0.16
APOC4P55056 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOC4P55056 LINC02228-203ENST00000641970 1355 ntBASIC16.02■□□□□ 0.16
APOC4P55056 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOC4P55056 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOC4P55056 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.02■□□□□ 0.16
APOC4P55056 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOC4P55056 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APOC4P55056 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
APOC4P55056 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.02■□□□□ 0.16
APOC4P55056 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.02■□□□□ 0.16
APOC4P55056 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.02■□□□□ 0.16
APOC4P55056 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APOC4P55056 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
APOC4P55056 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.02■□□□□ 0.16
APOC4P55056 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APOC4P55056 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APOC4P55056 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
APOC4P55056 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APOC4P55056 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
APOC4P55056 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APOC4P55056 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
APOC4P55056 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.01■□□□□ 0.15
APOC4P55056 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.01■□□□□ 0.15
APOC4P55056 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.01■□□□□ 0.15
APOC4P55056 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APOC4P55056 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.01■□□□□ 0.15
APOC4P55056 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APOC4P55056 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms