Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 YPT52YKR014C 705 nt5.87□□□□□ -1.47
UFD2P54860 RPN13YLR421C 471 nt5.87□□□□□ -1.47
UFD2P54860 YNL019CYNL019C 855 nt5.87□□□□□ -1.47
UFD2P54860 YNL033WYNL033W 855 nt5.87□□□□□ -1.47
UFD2P54860 ARF3YOR094W 552 nt5.87□□□□□ -1.47
UFD2P54860 PPT2YPL148C 522 nt5.87□□□□□ -1.47
UFD2P54860 ECM3YOR092W 1842 nt5.87□□□□□ -1.47
UFD2P54860 MSH1YHR120W 2880 nt5.87□□□□□ -1.47
UFD2P54860 SSZ1YHR064C 1617 nt5.86□□□□□ -1.47
UFD2P54860 TDA3YHR009C 1572 nt5.86□□□□□ -1.47
UFD2P54860 TDA6YPR157W 1404 nt5.86□□□□□ -1.47
UFD2P54860 YCL068CYCL068C 783 nt5.86□□□□□ -1.47
UFD2P54860 RRP45YDR280W 918 nt5.86□□□□□ -1.47
UFD2P54860 CAP2YIL034C 864 nt5.86□□□□□ -1.47
UFD2P54860 SPR2YOR214C 711 nt5.86□□□□□ -1.47
UFD2P54860 CPA1YOR303W 1236 nt5.86□□□□□ -1.47
UFD2P54860 YOR366WYOR366W 354 nt5.86□□□□□ -1.47
UFD2P54860 VTC2YFL004W 2487 nt5.86□□□□□ -1.47
UFD2P54860 SIA1YOR137C 1869 nt5.85□□□□□ -1.47
UFD2P54860 NGL3YML118W 1518 nt5.85□□□□□ -1.47
UFD2P54860 MST27YGL051W 705 nt5.85□□□□□ -1.47
UFD2P54860 YGL242CYGL242C 546 nt5.85□□□□□ -1.47
UFD2P54860 YGR293CYGR293C 462 nt5.85□□□□□ -1.47
UFD2P54860 BET4YJL031C 984 nt5.85□□□□□ -1.47
UFD2P54860 MST28YAR033W 705 nt5.85□□□□□ -1.47
UFD2P54860 YLR296WYLR296W 327 nt5.85□□□□□ -1.47
UFD2P54860 YPR172WYPR172W 603 nt5.85□□□□□ -1.47
UFD2P54860 YBR300CYBR300C 498 nt5.85□□□□□ -1.47
UFD2P54860 GAS3YMR215W 1575 nt5.84□□□□□ -1.47
UFD2P54860 ARG4YHR018C 1392 nt5.84□□□□□ -1.47
UFD2P54860 RGT1YKL038W 3513 nt5.84□□□□□ -1.47
UFD2P54860 YDL012CYDL012C 324 nt5.84□□□□□ -1.47
UFD2P54860 YDL027CYDL027C 1263 nt5.84□□□□□ -1.47
UFD2P54860 NUS1YDL193W 1128 nt5.84□□□□□ -1.47
UFD2P54860 URA3YEL021W 804 nt5.84□□□□□ -1.47
UFD2P54860 THP2YHR167W 786 nt5.84□□□□□ -1.47
UFD2P54860 AIM22YJL046W 1230 nt5.84□□□□□ -1.47
UFD2P54860 MET14YKL001C 609 nt5.84□□□□□ -1.47
UFD2P54860 YKR041WYKR041W 753 nt5.84□□□□□ -1.47
UFD2P54860 YLR444CYLR444C 303 nt5.84□□□□□ -1.47
UFD2P54860 YMR144WYMR144W 1029 nt5.84□□□□□ -1.47
UFD2P54860 YPR078CYPR078C 1119 nt5.84□□□□□ -1.47
UFD2P54860 ROG3YFR022W 2202 nt5.84□□□□□ -1.47
UFD2P54860 MDL1YLR188W 2088 nt5.84□□□□□ -1.47
UFD2P54860 ADE4YMR300C 1533 nt5.84□□□□□ -1.48
UFD2P54860 JEM1YJL073W 1938 nt5.84□□□□□ -1.48
UFD2P54860 FPK1YNR047W 2682 nt5.83□□□□□ -1.48
UFD2P54860 UBA1YKL210W 3075 nt5.83□□□□□ -1.48
UFD2P54860 WBP1YEL002C 1293 nt5.83□□□□□ -1.48
UFD2P54860 GIM4YEL003W 336 nt5.83□□□□□ -1.48
UFD2P54860 YJL028WYJL028W 336 nt5.83□□□□□ -1.48
UFD2P54860 NIS1YNL078W 1224 nt5.83□□□□□ -1.48
UFD2P54860 MIX23YBL107C 591 nt5.83□□□□□ -1.48
UFD2P54860 MNN2YBR015C 1794 nt5.83□□□□□ -1.48
UFD2P54860 YDR053WYDR053W 396 nt5.82□□□□□ -1.48
UFD2P54860 GLE2YER107C 1098 nt5.82□□□□□ -1.48
UFD2P54860 YFL051CYFL051C 483 nt5.82□□□□□ -1.48
UFD2P54860 YGR109W-AYGR109W-A 873 nt5.82□□□□□ -1.48
UFD2P54860 YIL082WYIL082W 873 nt5.82□□□□□ -1.48
UFD2P54860 CWC27YPL064C 906 nt5.82□□□□□ -1.48
UFD2P54860 TOM5YPR133W-A 153 nt5.82□□□□□ -1.48
UFD2P54860 CTS2YDR371W 1536 nt5.82□□□□□ -1.48
UFD2P54860 AAP1YHR047C 2571 nt5.82□□□□□ -1.48
UFD2P54860 IDS2YJL146W 1410 nt5.82□□□□□ -1.48
UFD2P54860 GPB1YOR371C 2694 nt5.81□□□□□ -1.48
UFD2P54860 TUB2YFL037W 1374 nt5.81□□□□□ -1.48
UFD2P54860 THP1YOL072W 1368 nt5.81□□□□□ -1.48
UFD2P54860 CTK1YKL139W 1587 nt5.81□□□□□ -1.48
UFD2P54860 SNO3YFL060C 669 nt5.81□□□□□ -1.48
UFD2P54860 FRA2YGL220W 363 nt5.81□□□□□ -1.48
UFD2P54860 NIT2YJL126W 924 nt5.81□□□□□ -1.48
UFD2P54860 MTW1YAL034W-A 870 nt5.81□□□□□ -1.48
UFD2P54860 CMS1YLR003C 876 nt5.81□□□□□ -1.48
UFD2P54860 SNO2YNL334C 669 nt5.81□□□□□ -1.48
UFD2P54860 PEX15YOL044W 1152 nt5.81□□□□□ -1.48
UFD2P54860 RIB4YOL143C 510 nt5.81□□□□□ -1.48
UFD2P54860 PET123YOR158W 957 nt5.81□□□□□ -1.48
UFD2P54860 YCL002CYCL002C 792 nt5.81□□□□□ -1.48
UFD2P54860 CAB3YKL088W 1716 nt5.81□□□□□ -1.48
UFD2P54860 RAD18YCR066W 1464 nt5.81□□□□□ -1.48
UFD2P54860 YTA12YMR089C 2478 nt5.81□□□□□ -1.48
UFD2P54860 YDR248CYDR248C 582 nt5.8□□□□□ -1.48
UFD2P54860 NOP16YER002W 696 nt5.8□□□□□ -1.48
UFD2P54860 YGR126WYGR126W 693 nt5.8□□□□□ -1.48
UFD2P54860 tX(XXX)DtX(XXX)D 100 nt5.8□□□□□ -1.48
UFD2P54860 YJR141WYJR141W 1044 nt5.8□□□□□ -1.48
UFD2P54860 KTI12YKL110C 942 nt5.8□□□□□ -1.48
UFD2P54860 RPS30AYLR287C-A 192 nt5.8□□□□□ -1.48
UFD2P54860 ELO3YLR372W 1038 nt5.8□□□□□ -1.48
UFD2P54860 CSI2YOL007C 1026 nt5.8□□□□□ -1.48
UFD2P54860 TRS33YOR115C 807 nt5.8□□□□□ -1.48
UFD2P54860 HSH49YOR319W 642 nt5.8□□□□□ -1.48
UFD2P54860 RXT2YBR095C 1293 nt5.8□□□□□ -1.48
UFD2P54860 CDC28YBR160W 897 nt5.8□□□□□ -1.48
UFD2P54860 PRR1YKL116C 1557 nt5.8□□□□□ -1.48
UFD2P54860 YEL077CYEL077C 3834 nt5.79□□□□□ -1.48
UFD2P54860 COT1YOR316C 1320 nt5.79□□□□□ -1.48
UFD2P54860 ERP3YDL018C 678 nt5.79□□□□□ -1.48
UFD2P54860 BUD25YER014C-A 462 nt5.79□□□□□ -1.48
UFD2P54860 YGL082WYGL082W 1146 nt5.79□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 25.9 ms