Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
GPC1P35052 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.71■□□□□ 0.91
GPC1P35052 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GPC1P35052 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GPC1P35052 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.71■□□□□ 0.91
GPC1P35052 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
GPC1P35052 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC1P35052 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC1P35052 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
GPC1P35052 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC1P35052 EP400NL-214ENST00000641289 2402 ntBASIC20.7■□□□□ 0.91
GPC1P35052 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.7■□□□□ 0.91
GPC1P35052 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC1P35052 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GPC1P35052 AC242852.2-201ENST00000615738 1807 ntBASIC20.7■□□□□ 0.9
GPC1P35052 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC1P35052 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.7■□□□□ 0.9
GPC1P35052 LINC01960-201ENST00000563759 1884 ntBASIC20.7■□□□□ 0.9
GPC1P35052 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GPC1P35052 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC1P35052 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.7■□□□□ 0.9
GPC1P35052 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GPC1P35052 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.7■□□□□ 0.9
GPC1P35052 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC1P35052 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC1P35052 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC1P35052 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
GPC1P35052 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.69■□□□□ 0.9
GPC1P35052 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.69■□□□□ 0.9
GPC1P35052 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
GPC1P35052 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GPC1P35052 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC1P35052 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GPC1P35052 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.69■□□□□ 0.9
GPC1P35052 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.69■□□□□ 0.9
GPC1P35052 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GPC1P35052 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC1P35052 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.69■□□□□ 0.9
GPC1P35052 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC1P35052 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
GPC1P35052 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC1P35052 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GPC1P35052 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GPC1P35052 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GPC1P35052 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC1P35052 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GPC1P35052 ECEL1P1-201ENST00000373592 1742 ntBASIC20.68■□□□□ 0.9
GPC1P35052 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.68■□□□□ 0.9
GPC1P35052 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC1P35052 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC1P35052 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC1P35052 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
GPC1P35052 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GPC1P35052 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC1P35052 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
GPC1P35052 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GPC1P35052 SRD5A1P1-201ENST00000442297 786 ntBASIC20.67■□□□□ 0.9
GPC1P35052 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC1P35052 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GPC1P35052 AC099791.2-201ENST00000605725 427 ntBASIC20.67■□□□□ 0.9
GPC1P35052 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.67■□□□□ 0.9
GPC1P35052 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC1P35052 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC1P35052 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC1P35052 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
GPC1P35052 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
GPC1P35052 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC1P35052 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GPC1P35052 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
GPC1P35052 AC087742.1-201ENST00000575880 1738 ntBASIC20.67■□□□□ 0.9
GPC1P35052 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC1P35052 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GPC1P35052 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GPC1P35052 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GPC1P35052 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC1P35052 AL499627.2-201ENST00000606283 725 ntBASIC20.66■□□□□ 0.9
GPC1P35052 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC1P35052 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC1P35052 LINC00526-201ENST00000581067 1875 ntBASIC20.66■□□□□ 0.9
GPC1P35052 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC1P35052 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC1P35052 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC1P35052 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GPC1P35052 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC1P35052 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC1P35052 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC1P35052 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GPC1P35052 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GPC1P35052 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC1P35052 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC1P35052 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC1P35052 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.65■□□□□ 0.9
GPC1P35052 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GPC1P35052 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC1P35052 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC1P35052 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC1P35052 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC1P35052 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPC1P35052 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPC1P35052 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms