Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CPT2-209ENST00000636935 803 ntTSL 5 BASIC31.44■■■□□ 2.62
CPS1P31327 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.43■■■□□ 2.62
CPS1P31327 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CPS1P31327 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CPS1P31327 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CPS1P31327 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CPS1P31327 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CPS1P31327 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CPS1P31327 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.42■■■□□ 2.62
CPS1P31327 AL596275.1-201ENST00000423464 877 ntBASIC31.42■■■□□ 2.62
CPS1P31327 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CPS1P31327 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC31.42■■■□□ 2.62
CPS1P31327 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CPS1P31327 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
CPS1P31327 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.42■■■□□ 2.62
CPS1P31327 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CPS1P31327 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CPS1P31327 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CPS1P31327 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
CPS1P31327 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CPS1P31327 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.41■■■□□ 2.62
CPS1P31327 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31.41■■■□□ 2.62
CPS1P31327 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC31.41■■■□□ 2.62
CPS1P31327 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
CPS1P31327 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CPS1P31327 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CPS1P31327 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CPS1P31327 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CPS1P31327 RNA5SP413-201ENST00000516373 109 ntBASIC31.4■■■□□ 2.62
CPS1P31327 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC31.4■■■□□ 2.62
CPS1P31327 SMUG1P1-201ENST00000590640 811 ntBASIC31.4■■■□□ 2.62
CPS1P31327 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CPS1P31327 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CPS1P31327 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CPS1P31327 EI24-213ENST00000618552 1747 ntTSL 5 BASIC31.4■■■□□ 2.62
CPS1P31327 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CPS1P31327 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CPS1P31327 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CPS1P31327 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CPS1P31327 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CPS1P31327 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC31.39■■■□□ 2.62
CPS1P31327 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC31.39■■■□□ 2.62
CPS1P31327 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CPS1P31327 SLC7A5P1-201ENST00000568957 537 ntBASIC31.39■■■□□ 2.62
CPS1P31327 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
CPS1P31327 AP003733.4-201ENST00000623785 1697 ntBASIC31.39■■■□□ 2.62
CPS1P31327 FP325331.1-202ENST00000623531 1380 ntBASIC31.39■■■□□ 2.62
CPS1P31327 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CPS1P31327 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC31.39■■■□□ 2.61
CPS1P31327 AF201337.1-201ENST00000520239 748 ntBASIC31.39■■■□□ 2.61
CPS1P31327 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.61
CPS1P31327 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.39■■■□□ 2.61
CPS1P31327 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
CPS1P31327 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CPS1P31327 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CPS1P31327 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CPS1P31327 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CPS1P31327 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.38■■■□□ 2.61
CPS1P31327 AC144652.1-201ENST00000609974 1624 ntBASIC31.38■■■□□ 2.61
CPS1P31327 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC31.37■■■□□ 2.61
CPS1P31327 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CPS1P31327 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CPS1P31327 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CPS1P31327 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CPS1P31327 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CPS1P31327 DUSP5P2-201ENST00000426873 1033 ntBASIC31.37■■■□□ 2.61
CPS1P31327 AC079140.4-201ENST00000507448 529 ntBASIC31.37■■■□□ 2.61
CPS1P31327 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC31.37■■■□□ 2.61
CPS1P31327 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CPS1P31327 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.37■■■□□ 2.61
CPS1P31327 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CPS1P31327 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CPS1P31327 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC31.36■■■□□ 2.61
CPS1P31327 AC133552.2-202ENST00000575694 574 ntBASIC31.36■■■□□ 2.61
CPS1P31327 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.36■■■□□ 2.61
CPS1P31327 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CPS1P31327 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.36■■■□□ 2.61
CPS1P31327 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CPS1P31327 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CPS1P31327 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CPS1P31327 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CPS1P31327 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.35■■■□□ 2.61
CPS1P31327 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.35■■■□□ 2.61
CPS1P31327 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
CPS1P31327 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC31.35■■■□□ 2.61
CPS1P31327 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CPS1P31327 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC31.34■■■□□ 2.61
CPS1P31327 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.34■■■□□ 2.61
CPS1P31327 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC31.34■■■□□ 2.61
CPS1P31327 UBE2DNL-204ENST00000602536 740 ntBASIC31.34■■■□□ 2.61
CPS1P31327 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CPS1P31327 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.34■■■□□ 2.61
CPS1P31327 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC31.34■■■□□ 2.61
CPS1P31327 AC022211.4-201ENST00000625094 2161 ntBASIC31.34■■■□□ 2.61
CPS1P31327 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CPS1P31327 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CPS1P31327 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CPS1P31327 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC31.34■■■□□ 2.61
CPS1P31327 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CPS1P31327 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms