Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC29.33■■■□□ 2.29
COL5A2P05997 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
COL5A2P05997 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC29.33■■■□□ 2.29
COL5A2P05997 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
COL5A2P05997 MIR4651-201ENST00000582622 73 ntBASIC29.33■■■□□ 2.29
COL5A2P05997 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.33■■■□□ 2.29
COL5A2P05997 AC087239.1-201ENST00000622671 572 ntBASIC29.33■■■□□ 2.29
COL5A2P05997 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
COL5A2P05997 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
COL5A2P05997 AC079630.1-202ENST00000618127 1840 ntBASIC29.33■■■□□ 2.29
COL5A2P05997 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
COL5A2P05997 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL5A2P05997 TFG-210ENST00000620299 1289 ntTSL 5 BASIC29.32■■■□□ 2.28
COL5A2P05997 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL5A2P05997 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL5A2P05997 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
COL5A2P05997 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL5A2P05997 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL5A2P05997 DUX4L16-201ENST00000555130 1264 ntBASIC29.31■■■□□ 2.28
COL5A2P05997 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC29.31■■■□□ 2.28
COL5A2P05997 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL5A2P05997 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL5A2P05997 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
COL5A2P05997 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL5A2P05997 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.31■■■□□ 2.28
COL5A2P05997 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.31■■■□□ 2.28
COL5A2P05997 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC29.31■■■□□ 2.28
COL5A2P05997 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
COL5A2P05997 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
COL5A2P05997 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC29.3■■■□□ 2.28
COL5A2P05997 AL138781.1-201ENST00000566567 1274 ntBASIC29.3■■■□□ 2.28
COL5A2P05997 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL5A2P05997 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
COL5A2P05997 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL5A2P05997 KRT87P-202ENST00000534226 1464 ntBASIC29.3■■■□□ 2.28
COL5A2P05997 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL5A2P05997 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC29.3■■■□□ 2.28
COL5A2P05997 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL5A2P05997 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
COL5A2P05997 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC29.29■■■□□ 2.28
COL5A2P05997 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC29.29■■■□□ 2.28
COL5A2P05997 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC29.29■■■□□ 2.28
COL5A2P05997 UBE2DNL-204ENST00000602536 740 ntBASIC29.29■■■□□ 2.28
COL5A2P05997 AC104187.1-201ENST00000607510 612 ntBASIC29.29■■■□□ 2.28
COL5A2P05997 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
COL5A2P05997 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC29.29■■■□□ 2.28
COL5A2P05997 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
COL5A2P05997 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC29.29■■■□□ 2.28
COL5A2P05997 AC231657.2-201ENST00000624556 255 ntBASIC29.29■■■□□ 2.28
COL5A2P05997 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
COL5A2P05997 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
COL5A2P05997 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.28■■■□□ 2.28
COL5A2P05997 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC29.28■■■□□ 2.28
COL5A2P05997 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
COL5A2P05997 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC29.28■■■□□ 2.28
COL5A2P05997 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
COL5A2P05997 OAS3-207ENST00000551007 998 ntTSL 2 BASIC29.28■■■□□ 2.28
COL5A2P05997 KLF13-207ENST00000560473 489 ntTSL 3 BASIC29.28■■■□□ 2.28
COL5A2P05997 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
COL5A2P05997 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
COL5A2P05997 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.27■■■□□ 2.28
COL5A2P05997 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
COL5A2P05997 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
COL5A2P05997 AC083906.2-201ENST00000511578 360 ntBASIC29.27■■■□□ 2.28
COL5A2P05997 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
COL5A2P05997 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC29.27■■■□□ 2.28
COL5A2P05997 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
COL5A2P05997 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC29.27■■■□□ 2.28
COL5A2P05997 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL5A2P05997 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL5A2P05997 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
COL5A2P05997 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC29.26■■■□□ 2.27
COL5A2P05997 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL5A2P05997 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL5A2P05997 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL5A2P05997 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL5A2P05997 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC29.25■■■□□ 2.27
COL5A2P05997 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC29.25■■■□□ 2.27
COL5A2P05997 AC005181.1-201ENST00000604782 1256 ntBASIC29.25■■■□□ 2.27
COL5A2P05997 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL5A2P05997 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
COL5A2P05997 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
COL5A2P05997 AC069152.1-201ENST00000438030 544 ntBASIC29.24■■■□□ 2.27
COL5A2P05997 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
COL5A2P05997 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC29.24■■■□□ 2.27
COL5A2P05997 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL5A2P05997 AC005224.4-201ENST00000583262 1652 ntBASIC29.24■■■□□ 2.27
COL5A2P05997 ASL-203ENST00000380839 1765 ntTSL 5 BASIC29.24■■■□□ 2.27
COL5A2P05997 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL5A2P05997 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
COL5A2P05997 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.24■■■□□ 2.27
COL5A2P05997 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC29.23■■■□□ 2.27
COL5A2P05997 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC29.23■■■□□ 2.27
COL5A2P05997 OXCT2P1-201ENST00000447263 1535 ntBASIC29.23■■■□□ 2.27
COL5A2P05997 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COL5A2P05997 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL5A2P05997 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC29.23■■■□□ 2.27
COL5A2P05997 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL5A2P05997 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC29.23■■■□□ 2.27
COL5A2P05997 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms