Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.7■■□□□ 1.06
SOD1P00441 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOD1P00441 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.69■■□□□ 1.06
SOD1P00441 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.69■■□□□ 1.06
SOD1P00441 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SOD1P00441 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOD1P00441 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOD1P00441 LINC01960-201ENST00000563759 1884 ntBASIC21.69■■□□□ 1.06
SOD1P00441 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOD1P00441 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOD1P00441 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOD1P00441 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOD1P00441 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOD1P00441 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.69■■□□□ 1.06
SOD1P00441 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.69■■□□□ 1.06
SOD1P00441 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOD1P00441 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SOD1P00441 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.69■■□□□ 1.06
SOD1P00441 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.69■■□□□ 1.06
SOD1P00441 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.69■■□□□ 1.06
SOD1P00441 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.68■■□□□ 1.06
SOD1P00441 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SOD1P00441 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOD1P00441 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOD1P00441 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SOD1P00441 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.68■■□□□ 1.06
SOD1P00441 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOD1P00441 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.68■■□□□ 1.06
SOD1P00441 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.68■■□□□ 1.06
SOD1P00441 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOD1P00441 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOD1P00441 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOD1P00441 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
SOD1P00441 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SOD1P00441 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SOD1P00441 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SOD1P00441 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOD1P00441 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SOD1P00441 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOD1P00441 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.67■■□□□ 1.06
SOD1P00441 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.67■■□□□ 1.06
SOD1P00441 AC010141.3-201ENST00000456659 717 ntBASIC21.67■■□□□ 1.06
SOD1P00441 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.67■■□□□ 1.06
SOD1P00441 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.67■■□□□ 1.06
SOD1P00441 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.67■■□□□ 1.06
SOD1P00441 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOD1P00441 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
SOD1P00441 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOD1P00441 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.67■■□□□ 1.06
SOD1P00441 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOD1P00441 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
SOD1P00441 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOD1P00441 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOD1P00441 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOD1P00441 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.66■■□□□ 1.06
SOD1P00441 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.66■■□□□ 1.06
SOD1P00441 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOD1P00441 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.66■■□□□ 1.06
SOD1P00441 AC012414.1-201ENST00000556676 535 ntBASIC21.66■■□□□ 1.06
SOD1P00441 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.66■■□□□ 1.06
SOD1P00441 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SOD1P00441 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOD1P00441 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOD1P00441 C9orf163-202ENST00000624034 2573 ntBASIC21.66■■□□□ 1.06
SOD1P00441 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOD1P00441 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOD1P00441 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOD1P00441 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SOD1P00441 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.65■■□□□ 1.06
SOD1P00441 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.65■■□□□ 1.06
SOD1P00441 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOD1P00441 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SOD1P00441 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.64■■□□□ 1.06
SOD1P00441 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.64■■□□□ 1.06
SOD1P00441 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.64■■□□□ 1.06
SOD1P00441 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.64■■□□□ 1.06
SOD1P00441 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SOD1P00441 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.64■■□□□ 1.05
SOD1P00441 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.64■■□□□ 1.05
SOD1P00441 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.64■■□□□ 1.05
SOD1P00441 MIR6084-201ENST00000622012 110 ntBASIC21.64■■□□□ 1.05
SOD1P00441 AL358852.1-201ENST00000623174 1268 ntBASIC21.64■■□□□ 1.05
SOD1P00441 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.64■■□□□ 1.05
SOD1P00441 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SOD1P00441 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SOD1P00441 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SOD1P00441 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOD1P00441 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOD1P00441 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SOD1P00441 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOD1P00441 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.63■■□□□ 1.05
SOD1P00441 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SOD1P00441 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.63■■□□□ 1.05
SOD1P00441 AC097381.1-201ENST00000429019 1296 ntBASIC21.63■■□□□ 1.05
SOD1P00441 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SOD1P00441 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.63■■□□□ 1.05
SOD1P00441 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.63■■□□□ 1.05
SOD1P00441 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOD1P00441 OXCT2P1-201ENST00000447263 1535 ntBASIC21.63■■□□□ 1.05
SOD1P00441 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms