Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.71■■□□□ 1.55
GGPS1O95749 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
GGPS1O95749 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
GGPS1O95749 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
GGPS1O95749 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
GGPS1O95749 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.7■■□□□ 1.54
GGPS1O95749 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
GGPS1O95749 ANOS2P-203ENST00000472227 1816 ntBASIC24.7■■□□□ 1.54
GGPS1O95749 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
GGPS1O95749 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.7■■□□□ 1.54
GGPS1O95749 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.7■■□□□ 1.54
GGPS1O95749 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
GGPS1O95749 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
GGPS1O95749 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.69■■□□□ 1.54
GGPS1O95749 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.69■■□□□ 1.54
GGPS1O95749 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
GGPS1O95749 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.69■■□□□ 1.54
GGPS1O95749 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.69■■□□□ 1.54
GGPS1O95749 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
GGPS1O95749 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
GGPS1O95749 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
GGPS1O95749 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
GGPS1O95749 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.69■■□□□ 1.54
GGPS1O95749 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.69■■□□□ 1.54
GGPS1O95749 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.69■■□□□ 1.54
GGPS1O95749 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
GGPS1O95749 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
GGPS1O95749 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
GGPS1O95749 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
GGPS1O95749 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
GGPS1O95749 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
GGPS1O95749 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
GGPS1O95749 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
GGPS1O95749 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.68■■□□□ 1.54
GGPS1O95749 AC010141.3-201ENST00000456659 717 ntBASIC24.68■■□□□ 1.54
GGPS1O95749 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
GGPS1O95749 NTF6G-201ENST00000591094 616 ntBASIC24.68■■□□□ 1.54
GGPS1O95749 AC087239.1-201ENST00000622671 572 ntBASIC24.68■■□□□ 1.54
GGPS1O95749 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
GGPS1O95749 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.68■■□□□ 1.54
GGPS1O95749 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.68■■□□□ 1.54
GGPS1O95749 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.68■■□□□ 1.54
GGPS1O95749 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
GGPS1O95749 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
GGPS1O95749 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
GGPS1O95749 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.67■■□□□ 1.54
GGPS1O95749 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
GGPS1O95749 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
GGPS1O95749 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.67■■□□□ 1.54
GGPS1O95749 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
GGPS1O95749 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.67■■□□□ 1.54
GGPS1O95749 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
GGPS1O95749 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
GGPS1O95749 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
GGPS1O95749 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.66■■□□□ 1.54
GGPS1O95749 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.66■■□□□ 1.54
GGPS1O95749 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.66■■□□□ 1.54
GGPS1O95749 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.66■■□□□ 1.54
GGPS1O95749 AC092437.1-201ENST00000624794 1048 ntBASIC24.66■■□□□ 1.54
GGPS1O95749 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.66■■□□□ 1.54
GGPS1O95749 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.66■■□□□ 1.54
GGPS1O95749 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
GGPS1O95749 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
GGPS1O95749 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
GGPS1O95749 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
GGPS1O95749 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
GGPS1O95749 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
GGPS1O95749 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
GGPS1O95749 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.65■■□□□ 1.54
GGPS1O95749 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
GGPS1O95749 TPRG1LP1-201ENST00000598702 760 ntBASIC24.65■■□□□ 1.54
GGPS1O95749 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
GGPS1O95749 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
GGPS1O95749 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
GGPS1O95749 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.65■■□□□ 1.54
GGPS1O95749 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
GGPS1O95749 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
GGPS1O95749 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
GGPS1O95749 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
GGPS1O95749 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
GGPS1O95749 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.64■■□□□ 1.54
GGPS1O95749 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
GGPS1O95749 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
GGPS1O95749 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
GGPS1O95749 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.64■■□□□ 1.53
GGPS1O95749 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.64■■□□□ 1.53
GGPS1O95749 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
GGPS1O95749 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
GGPS1O95749 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
GGPS1O95749 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
GGPS1O95749 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
GGPS1O95749 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
GGPS1O95749 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.63■■□□□ 1.53
GGPS1O95749 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.63■■□□□ 1.53
GGPS1O95749 AL137784.2-201ENST00000607332 1000 ntBASIC24.63■■□□□ 1.53
GGPS1O95749 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.63■■□□□ 1.53
GGPS1O95749 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
GGPS1O95749 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
GGPS1O95749 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
GGPS1O95749 AC092068.2-201ENST00000590491 1708 ntBASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms