Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPP40O75818 DUSP8P3-201ENST00000399571 1760 ntBASIC22.53■■□□□ 1.2
RPP40O75818 LINC02228-203ENST00000641970 1355 ntBASIC22.52■■□□□ 1.2
RPP40O75818 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RPP40O75818 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPP40O75818 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.52■■□□□ 1.2
RPP40O75818 AC079630.1-202ENST00000618127 1840 ntBASIC22.52■■□□□ 1.2
RPP40O75818 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.51■■□□□ 1.19
RPP40O75818 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.51■■□□□ 1.19
RPP40O75818 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.51■■□□□ 1.19
RPP40O75818 TERF1P2-201ENST00000583350 1212 ntBASIC22.51■■□□□ 1.19
RPP40O75818 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
RPP40O75818 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPP40O75818 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPP40O75818 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPP40O75818 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.5■■□□□ 1.19
RPP40O75818 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.5■■□□□ 1.19
RPP40O75818 HLA-L-209ENST00000420110 1011 ntBASIC22.5■■□□□ 1.19
RPP40O75818 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RPP40O75818 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPP40O75818 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RPP40O75818 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPP40O75818 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RPP40O75818 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
RPP40O75818 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPP40O75818 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RPP40O75818 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPP40O75818 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RPP40O75818 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPP40O75818 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
RPP40O75818 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPP40O75818 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.49■■□□□ 1.19
RPP40O75818 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.49■■□□□ 1.19
RPP40O75818 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPP40O75818 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.49■■□□□ 1.19
RPP40O75818 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.49■■□□□ 1.19
RPP40O75818 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.49■■□□□ 1.19
RPP40O75818 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RPP40O75818 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.49■■□□□ 1.19
RPP40O75818 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPP40O75818 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.48■■□□□ 1.19
RPP40O75818 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPP40O75818 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.48■■□□□ 1.19
RPP40O75818 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.48■■□□□ 1.19
RPP40O75818 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RPP40O75818 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.48■■□□□ 1.19
RPP40O75818 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RPP40O75818 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.48■■□□□ 1.19
RPP40O75818 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.48■■□□□ 1.19
RPP40O75818 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPP40O75818 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RPP40O75818 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.48■■□□□ 1.19
RPP40O75818 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.47■■□□□ 1.19
RPP40O75818 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RPP40O75818 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPP40O75818 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RPP40O75818 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPP40O75818 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.47■■□□□ 1.19
RPP40O75818 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RPP40O75818 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
RPP40O75818 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RPP40O75818 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
RPP40O75818 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.47■■□□□ 1.19
RPP40O75818 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPP40O75818 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.47■■□□□ 1.19
RPP40O75818 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPP40O75818 AC133637.1-201ENST00000624115 1537 ntBASIC22.47■■□□□ 1.19
RPP40O75818 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPP40O75818 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPP40O75818 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPP40O75818 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPP40O75818 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPP40O75818 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RPP40O75818 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPP40O75818 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RPP40O75818 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.46■■□□□ 1.19
RPP40O75818 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RPP40O75818 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.46■■□□□ 1.19
RPP40O75818 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.46■■□□□ 1.19
RPP40O75818 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
RPP40O75818 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPP40O75818 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.46■■□□□ 1.19
RPP40O75818 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RPP40O75818 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RPP40O75818 AC068473.5-201ENST00000616428 2072 ntBASIC22.45■■□□□ 1.18
RPP40O75818 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPP40O75818 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RPP40O75818 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPP40O75818 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPP40O75818 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPP40O75818 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms