Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN2BO60939 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.78■□□□□ 0.92
SCN2BO60939 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.78■□□□□ 0.92
SCN2BO60939 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN2BO60939 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN2BO60939 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCN2BO60939 AL451085.2-201ENST00000605085 799 ntBASIC20.78■□□□□ 0.92
SCN2BO60939 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
SCN2BO60939 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN2BO60939 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCN2BO60939 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN2BO60939 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN2BO60939 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN2BO60939 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN2BO60939 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SCN2BO60939 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.77■□□□□ 0.92
SCN2BO60939 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN2BO60939 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN2BO60939 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN2BO60939 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.77■□□□□ 0.92
SCN2BO60939 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN2BO60939 AC004687.1-201ENST00000579003 1625 ntBASIC20.77■□□□□ 0.92
SCN2BO60939 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN2BO60939 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN2BO60939 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 AC007375.3-201ENST00000600936 2314 ntBASIC20.76■□□□□ 0.91
SCN2BO60939 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
SCN2BO60939 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN2BO60939 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SCN2BO60939 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN2BO60939 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN2BO60939 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN2BO60939 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN2BO60939 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN2BO60939 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN2BO60939 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN2BO60939 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN2BO60939 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN2BO60939 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN2BO60939 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN2BO60939 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN2BO60939 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN2BO60939 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.74■□□□□ 0.91
SCN2BO60939 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCN2BO60939 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SCN2BO60939 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCN2BO60939 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCN2BO60939 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN2BO60939 CA15P2-201ENST00000611168 834 ntBASIC20.74■□□□□ 0.91
SCN2BO60939 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCN2BO60939 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN2BO60939 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN2BO60939 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN2BO60939 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN2BO60939 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN2BO60939 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN2BO60939 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN2BO60939 TSPY9P-201ENST00000440215 945 ntBASIC20.73■□□□□ 0.91
SCN2BO60939 TSPY11P-201ENST00000442607 1045 ntBASIC20.73■□□□□ 0.91
SCN2BO60939 UNC93B8-201ENST00000511903 705 ntBASIC20.73■□□□□ 0.91
SCN2BO60939 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN2BO60939 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.73■□□□□ 0.91
SCN2BO60939 AL499627.2-201ENST00000606283 725 ntBASIC20.73■□□□□ 0.91
SCN2BO60939 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SCN2BO60939 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN2BO60939 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN2BO60939 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN2BO60939 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SCN2BO60939 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN2BO60939 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN2BO60939 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN2BO60939 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN2BO60939 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN2BO60939 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN2BO60939 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN2BO60939 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN2BO60939 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN2BO60939 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN2BO60939 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN2BO60939 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN2BO60939 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SCN2BO60939 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCN2BO60939 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN2BO60939 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN2BO60939 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN2BO60939 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN2BO60939 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN2BO60939 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN2BO60939 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.7■□□□□ 0.91
SCN2BO60939 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms