Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
BRD4O60885 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.51■■■□□ 2.47
BRD4O60885 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
BRD4O60885 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC30.51■■■□□ 2.47
BRD4O60885 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC30.51■■■□□ 2.47
BRD4O60885 MPST-204ENST00000404393 1329 ntTSL 5 BASIC30.51■■■□□ 2.47
BRD4O60885 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC30.51■■■□□ 2.47
BRD4O60885 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC30.51■■■□□ 2.47
BRD4O60885 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30.51■■■□□ 2.47
BRD4O60885 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.51■■■□□ 2.47
BRD4O60885 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
BRD4O60885 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
BRD4O60885 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
BRD4O60885 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
BRD4O60885 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
BRD4O60885 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC30.5■■■□□ 2.47
BRD4O60885 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
BRD4O60885 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC30.5■■■□□ 2.47
BRD4O60885 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.5■■■□□ 2.47
BRD4O60885 AC068473.5-201ENST00000616428 2072 ntBASIC30.49■■■□□ 2.47
BRD4O60885 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
BRD4O60885 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC30.49■■■□□ 2.47
BRD4O60885 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC30.49■■■□□ 2.47
BRD4O60885 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
BRD4O60885 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
BRD4O60885 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
BRD4O60885 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
BRD4O60885 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
BRD4O60885 ME3-201ENST00000323418 1068 ntTSL 5 BASIC30.48■■■□□ 2.47
BRD4O60885 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC30.48■■■□□ 2.47
BRD4O60885 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
BRD4O60885 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC30.48■■■□□ 2.47
BRD4O60885 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.48■■■□□ 2.47
BRD4O60885 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
BRD4O60885 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
BRD4O60885 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
BRD4O60885 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
BRD4O60885 LINC01529-204ENST00000636474 1715 ntBASIC30.47■■■□□ 2.47
BRD4O60885 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
BRD4O60885 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
BRD4O60885 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.47■■■□□ 2.47
BRD4O60885 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
BRD4O60885 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
BRD4O60885 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
BRD4O60885 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
BRD4O60885 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
BRD4O60885 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
BRD4O60885 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC30.46■■■□□ 2.47
BRD4O60885 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
BRD4O60885 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC30.46■■■□□ 2.47
BRD4O60885 NTF6G-201ENST00000591094 616 ntBASIC30.46■■■□□ 2.47
BRD4O60885 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
BRD4O60885 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
BRD4O60885 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
BRD4O60885 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC30.46■■■□□ 2.47
BRD4O60885 AC079630.1-202ENST00000618127 1840 ntBASIC30.45■■■□□ 2.47
BRD4O60885 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
BRD4O60885 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.45■■■□□ 2.47
BRD4O60885 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC30.45■■■□□ 2.47
BRD4O60885 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
BRD4O60885 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.45■■■□□ 2.47
BRD4O60885 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
BRD4O60885 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC30.45■■■□□ 2.46
BRD4O60885 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
BRD4O60885 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
BRD4O60885 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
BRD4O60885 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
BRD4O60885 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.44■■■□□ 2.46
BRD4O60885 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
BRD4O60885 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
BRD4O60885 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
BRD4O60885 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.44■■■□□ 2.46
BRD4O60885 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
BRD4O60885 ME2-208ENST00000638937 2471 ntTSL 5 BASIC30.43■■■□□ 2.46
BRD4O60885 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.43■■■□□ 2.46
BRD4O60885 VPS53-216ENST00000574029 585 ntTSL 4 BASIC30.43■■■□□ 2.46
BRD4O60885 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
BRD4O60885 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
BRD4O60885 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
BRD4O60885 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.42■■■□□ 2.46
BRD4O60885 NT5C3AP1-201ENST00000394500 1012 ntBASIC30.42■■■□□ 2.46
BRD4O60885 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.42■■■□□ 2.46
BRD4O60885 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.42■■■□□ 2.46
BRD4O60885 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
BRD4O60885 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC30.41■■■□□ 2.46
BRD4O60885 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.41■■■□□ 2.46
BRD4O60885 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.41■■■□□ 2.46
BRD4O60885 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC30.41■■■□□ 2.46
BRD4O60885 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC30.41■■■□□ 2.46
BRD4O60885 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC30.41■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms