Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCAO00442 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.9■□□□□ 0.94
RTCAO00442 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RTCAO00442 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.9■□□□□ 0.94
RTCAO00442 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.9■□□□□ 0.94
RTCAO00442 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
RTCAO00442 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTCAO00442 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTCAO00442 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RTCAO00442 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RTCAO00442 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RTCAO00442 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.89■□□□□ 0.93
RTCAO00442 AC010525.1-201ENST00000585559 441 ntBASIC20.89■□□□□ 0.93
RTCAO00442 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.89■□□□□ 0.93
RTCAO00442 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
RTCAO00442 EP400NL-214ENST00000641289 2402 ntBASIC20.89■□□□□ 0.93
RTCAO00442 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.89■□□□□ 0.93
RTCAO00442 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTCAO00442 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 AC080038.3-201ENST00000623346 1952 ntBASIC20.88■□□□□ 0.93
RTCAO00442 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RTCAO00442 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RTCAO00442 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 AC096631.2-201ENST00000436136 790 ntBASIC20.88■□□□□ 0.93
RTCAO00442 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 AL138724.1-201ENST00000606771 1088 ntBASIC20.88■□□□□ 0.93
RTCAO00442 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RTCAO00442 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCAO00442 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTCAO00442 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RTCAO00442 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTCAO00442 AC011298.3-201ENST00000615796 283 ntBASIC20.87■□□□□ 0.93
RTCAO00442 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.87■□□□□ 0.93
RTCAO00442 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RTCAO00442 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.87■□□□□ 0.93
RTCAO00442 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RTCAO00442 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RTCAO00442 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.87■□□□□ 0.93
RTCAO00442 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCAO00442 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCAO00442 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTCAO00442 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.86■□□□□ 0.93
RTCAO00442 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.86■□□□□ 0.93
RTCAO00442 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.86■□□□□ 0.93
RTCAO00442 AC024257.2-201ENST00000549699 147 ntBASIC20.86■□□□□ 0.93
RTCAO00442 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.86■□□□□ 0.93
RTCAO00442 AL136162.1-201ENST00000607711 1078 ntBASIC20.86■□□□□ 0.93
RTCAO00442 AC136469.2-201ENST00000623944 1028 ntBASIC20.86■□□□□ 0.93
RTCAO00442 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCAO00442 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RTCAO00442 AC127496.7-201ENST00000625110 1798 ntBASIC20.86■□□□□ 0.93
RTCAO00442 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RTCAO00442 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCAO00442 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCAO00442 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.86■□□□□ 0.93
RTCAO00442 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCAO00442 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCAO00442 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.85■□□□□ 0.93
RTCAO00442 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCAO00442 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.85■□□□□ 0.93
RTCAO00442 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.85■□□□□ 0.93
RTCAO00442 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.85■□□□□ 0.93
RTCAO00442 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.85■□□□□ 0.93
RTCAO00442 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RTCAO00442 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTCAO00442 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RTCAO00442 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCAO00442 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCAO00442 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RTCAO00442 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RTCAO00442 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RTCAO00442 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.84■□□□□ 0.93
RTCAO00442 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms