Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.8■■□□□ 1.08
H3BM21 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
H3BM21 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
H3BM21 AC123595.1-201ENST00000440769 1046 ntBASIC21.8■■□□□ 1.08
H3BM21 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3BM21 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3BM21 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3BM21 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.8■■□□□ 1.08
H3BM21 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3BM21 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
H3BM21 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H3BM21 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.79■■□□□ 1.08
H3BM21 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
H3BM21 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H3BM21 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.79■■□□□ 1.08
H3BM21 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.79■■□□□ 1.08
H3BM21 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.79■■□□□ 1.08
H3BM21 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.79■■□□□ 1.08
H3BM21 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
H3BM21 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H3BM21 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
H3BM21 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H3BM21 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H3BM21 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
H3BM21 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
H3BM21 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H3BM21 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.78■■□□□ 1.08
H3BM21 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.78■■□□□ 1.08
H3BM21 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
H3BM21 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.78■■□□□ 1.08
H3BM21 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.78■■□□□ 1.08
H3BM21 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.78■■□□□ 1.08
H3BM21 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
H3BM21 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
H3BM21 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
H3BM21 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
H3BM21 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
H3BM21 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
H3BM21 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
H3BM21 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
H3BM21 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
H3BM21 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
H3BM21 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
H3BM21 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
H3BM21 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
H3BM21 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.77■■□□□ 1.08
H3BM21 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
H3BM21 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.77■■□□□ 1.08
H3BM21 MIR6084-201ENST00000622012 110 ntBASIC21.77■■□□□ 1.08
H3BM21 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
H3BM21 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.77■■□□□ 1.07
H3BM21 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
H3BM21 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.76■■□□□ 1.07
H3BM21 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
H3BM21 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
H3BM21 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
H3BM21 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
H3BM21 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.76■■□□□ 1.07
H3BM21 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.76■■□□□ 1.07
H3BM21 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
H3BM21 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.76■■□□□ 1.07
H3BM21 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H3BM21 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H3BM21 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
H3BM21 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H3BM21 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
H3BM21 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H3BM21 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
H3BM21 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H3BM21 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.74■■□□□ 1.07
H3BM21 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H3BM21 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H3BM21 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H3BM21 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.74■■□□□ 1.07
H3BM21 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.74■■□□□ 1.07
H3BM21 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.74■■□□□ 1.07
H3BM21 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
H3BM21 AL031602.1-201ENST00000633169 911 ntBASIC21.74■■□□□ 1.07
H3BM21 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
H3BM21 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.74■■□□□ 1.07
H3BM21 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
H3BM21 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.74■■□□□ 1.07
H3BM21 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
H3BM21 AC133561.1-201ENST00000568600 2415 ntBASIC21.74■■□□□ 1.07
H3BM21 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
H3BM21 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
H3BM21 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
H3BM21 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.73■■□□□ 1.07
H3BM21 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H3BM21 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H3BM21 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H3BM21 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
H3BM21 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.73■■□□□ 1.07
H3BM21 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.73■■□□□ 1.07
H3BM21 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.73■■□□□ 1.07
H3BM21 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H3BM21 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H3BM21 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.72■■□□□ 1.07
H3BM21 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.72■■□□□ 1.07
H3BM21 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms