Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 AC004687.1-201ENST00000579003 1625 ntBASIC17.5■□□□□ 0.39
CGB1A6NKQ9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.49■□□□□ 0.39
CGB1A6NKQ9 CLDN5-201ENST00000403084 2357 ntBASIC17.48■□□□□ 0.39
CGB1A6NKQ9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 LINC01960-201ENST00000563759 1884 ntBASIC17.48■□□□□ 0.39
CGB1A6NKQ9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CGB1A6NKQ9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 AC092053.2-201ENST00000640557 1818 ntBASIC17.47■□□□□ 0.39
CGB1A6NKQ9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CGB1A6NKQ9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 GUSBP5-201ENST00000418136 578 ntBASIC17.46■□□□□ 0.39
CGB1A6NKQ9 KRT16P3-201ENST00000439127 1283 ntBASIC17.46■□□□□ 0.39
CGB1A6NKQ9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CGB1A6NKQ9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.46■□□□□ 0.38
CGB1A6NKQ9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CGB1A6NKQ9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CGB1A6NKQ9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CGB1A6NKQ9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 AL499627.2-201ENST00000606283 725 ntBASIC17.45■□□□□ 0.38
CGB1A6NKQ9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 AL117332.1-201ENST00000622628 974 ntBASIC17.45■□□□□ 0.38
CGB1A6NKQ9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CGB1A6NKQ9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CGB1A6NKQ9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.44■□□□□ 0.38
CGB1A6NKQ9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CGB1A6NKQ9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CGB1A6NKQ9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CGB1A6NKQ9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms