Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 AL157384.1-201ENST00000445995 2473 ntBASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 LINC01521-201ENST00000504184 1943 ntBASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 AC092667.1-201ENST00000434301 2586 ntBASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 FEM1AP4-201ENST00000443167 1987 ntBASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV3S1A0A5B6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV3S1A0A5B6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 AF106564.1-201ENST00000607058 2553 ntBASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV3S1A0A5B6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 AC019171.1-201ENST00000601251 1056 ntBASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV3S1A0A5B6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 LINC01529-204ENST00000636474 1715 ntBASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.5■□□□□ 0.87
TCRBV3S1A0A5B6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 AC120024.1-201ENST00000562672 995 ntBASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 CA15P2-201ENST00000611168 834 ntBASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TCRBV3S1A0A5B6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms