Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 SLC25A24-204ENST00000569674 2357 ntBASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV27A0A0K0K1C4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 AC005229.4-201ENST00000610085 2198 ntBASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 AC074183.2-201ENST00000623112 922 ntBASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.46■□□□□ 0.07
TRBV27A0A0K0K1C4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TRBV27A0A0K0K1C4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.46■□□□□ 0.06
TRBV27A0A0K0K1C4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 SNX5-217ENST00000606557 1087 ntBASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV27A0A0K0K1C4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 CA15P2-201ENST00000611168 834 ntBASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV27A0A0K0K1C4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 DUX4L4-201ENST00000566884 1269 ntBASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TRBV27A0A0K0K1C4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms