Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC010141.3-201ENST00000456659 717 ntBASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC012414.1-201ENST00000556676 535 ntBASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AL358852.1-201ENST00000623174 1268 ntBASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV11-1A0A0K0K1C0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 MIR6084-201ENST00000622012 110 ntBASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC105233.4-201ENST00000642045 216 ntBASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 LINC01960-201ENST00000563759 1884 ntBASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV11-1A0A0K0K1C0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC026271.2-201ENST00000428091 497 ntBASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.27■□□□□ 0.84
TRBV11-1A0A0K0K1C0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRBV11-1A0A0K0K1C0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRBV11-1A0A0K0K1C0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV11-1A0A0K0K1C0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV11-1A0A0K0K1C0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV11-1A0A0K0K1C0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRBV11-1A0A0K0K1C0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.26■□□□□ 0.83
TRBV11-1A0A0K0K1C0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV11-1A0A0K0K1C0 AL354811.1-201ENST00000610286 706 ntBASIC20.26■□□□□ 0.83
TRBV11-1A0A0K0K1C0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV11-1A0A0K0K1C0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TRBV11-1A0A0K0K1C0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms