Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.91■■□□□ 1.1
CCDC163A0A0D9SF12 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC163A0A0D9SF12 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC163A0A0D9SF12 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC163A0A0D9SF12 AC004687.1-201ENST00000579003 1625 ntBASIC21.91■■□□□ 1.1
CCDC163A0A0D9SF12 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC163A0A0D9SF12 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC163A0A0D9SF12 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC163A0A0D9SF12 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC163A0A0D9SF12 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC163A0A0D9SF12 AC066615.1-201ENST00000640911 628 ntBASIC21.9■■□□□ 1.1
CCDC163A0A0D9SF12 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC163A0A0D9SF12 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC163A0A0D9SF12 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC163A0A0D9SF12 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC163A0A0D9SF12 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC163A0A0D9SF12 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC163A0A0D9SF12 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 AL050303.2-201ENST00000619798 666 ntBASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC163A0A0D9SF12 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 AC007322.1-201ENST00000426983 750 ntBASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 TSPY20P-201ENST00000450910 630 ntBASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 SLC7A5P2-201ENST00000553010 536 ntBASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 DUX4L16-201ENST00000555130 1264 ntBASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 KRT87P-202ENST00000534226 1464 ntBASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC163A0A0D9SF12 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC163A0A0D9SF12 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 GUSBP6-202ENST00000438529 1198 ntBASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 AC009237.3-201ENST00000393279 1427 ntBASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC163A0A0D9SF12 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 AC005181.1-201ENST00000604782 1256 ntBASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC163A0A0D9SF12 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC163A0A0D9SF12 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC163A0A0D9SF12 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
CCDC163A0A0D9SF12 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC163A0A0D9SF12 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms