Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC241377.3-202ENST00000626088 1088 ntBASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC241585.3-202ENST00000628937 1088 ntBASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC245100.8-202ENST00000629247 1058 ntBASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-8A0A0A6YYG3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 C11orf96-202ENST00000528572 1834 ntBASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AL035685.1-201ENST00000636663 812 ntBASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV6-8A0A0A6YYG3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AL499627.2-201ENST00000606283 725 ntBASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-8A0A0A6YYG3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.21■□□□□ 0.02
TRBV6-8A0A0A6YYG3 AC137767.1-201ENST00000602918 1920 ntBASIC15.21■□□□□ 0.02
TRBV6-8A0A0A6YYG3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-8A0A0A6YYG3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-8A0A0A6YYG3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TRBV6-8A0A0A6YYG3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 AL356740.2-201ENST00000601559 647 ntBASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms