Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 HLA-L-211ENST00000482052 1765 ntBASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV9-2A0A087WT02 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
TRAV9-2A0A087WT02 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TRAV9-2A0A087WT02 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.21■□□□□ 0.18
TRAV9-2A0A087WT02 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-2A0A087WT02 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-2A0A087WT02 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-2A0A087WT02 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 LONRF2P2-201ENST00000439212 571 ntBASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV9-2A0A087WT02 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 MIR4508-201ENST00000584178 70 ntBASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-2A0A087WT02 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms