Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV25-1A0A075B6N4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 C11orf96-202ENST00000528572 1834 ntBASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 MIR4281-201ENST00000580852 62 ntBASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV25-1A0A075B6N4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.71■□□□□ 0.1
TRBV25-1A0A075B6N4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV25-1A0A075B6N4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV25-1A0A075B6N4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV25-1A0A075B6N4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 AC026310.3-201ENST00000625186 2373 ntBASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV25-1A0A075B6N4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 AC010980.1-201ENST00000587192 1142 ntBASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBV25-1A0A075B6N4 ESRRAP2-201ENST00000418437 1549 ntBASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TRBV25-1A0A075B6N4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV25-1A0A075B6N4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.67■□□□□ 0.1
TRBV25-1A0A075B6N4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV25-1A0A075B6N4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV25-1A0A075B6N4 AF131216.4-201ENST00000638924 1588 ntBASIC15.67■□□□□ 0.1
TRBV25-1A0A075B6N4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms