Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 AC010997.5-201ENST00000609182 354 ntBASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHA5Q9Y5H7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA5Q9Y5H7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 C17orf82-201ENST00000623772 1530 ntBASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 AC004687.1-201ENST00000579003 1625 ntBASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PCDHA5Q9Y5H7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA5Q9Y5H7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA5Q9Y5H7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA5Q9Y5H7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
PCDHA5Q9Y5H7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHA5Q9Y5H7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHA5Q9Y5H7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA5Q9Y5H7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA5Q9Y5H7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA5Q9Y5H7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 TSPY9P-201ENST00000440215 945 ntBASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 TSPY11P-201ENST00000442607 1045 ntBASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
PCDHA5Q9Y5H7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA5Q9Y5H7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHA5Q9Y5H7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA5Q9Y5H7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHA5Q9Y5H7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA5Q9Y5H7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHA5Q9Y5H7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
PCDHA5Q9Y5H7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHA5Q9Y5H7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA5Q9Y5H7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA5Q9Y5H7 GUSBP5-201ENST00000418136 578 ntBASIC24.57■■□□□ 1.52
PCDHA5Q9Y5H7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.57■■□□□ 1.52
PCDHA5Q9Y5H7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDHA5Q9Y5H7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA5Q9Y5H7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA5Q9Y5H7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA5Q9Y5H7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA5Q9Y5H7 FBXW4P1-201ENST00000426721 2239 ntBASIC24.56■■□□□ 1.52
PCDHA5Q9Y5H7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA5Q9Y5H7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA5Q9Y5H7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA5Q9Y5H7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA5Q9Y5H7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.56■■□□□ 1.52
PCDHA5Q9Y5H7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA5Q9Y5H7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHA5Q9Y5H7 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHA5Q9Y5H7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA5Q9Y5H7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA5Q9Y5H7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA5Q9Y5H7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHA5Q9Y5H7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA5Q9Y5H7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
PCDHA5Q9Y5H7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHA5Q9Y5H7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms