Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCE1Q9Y256 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCE1Q9Y256 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RCE1Q9Y256 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.76■□□□□ 0.75
RCE1Q9Y256 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.76■□□□□ 0.75
RCE1Q9Y256 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
RCE1Q9Y256 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCE1Q9Y256 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
RCE1Q9Y256 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RCE1Q9Y256 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCE1Q9Y256 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.76■□□□□ 0.75
RCE1Q9Y256 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCE1Q9Y256 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCE1Q9Y256 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RCE1Q9Y256 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.75■□□□□ 0.75
RCE1Q9Y256 AC099791.2-201ENST00000605725 427 ntBASIC19.75■□□□□ 0.75
RCE1Q9Y256 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.75■□□□□ 0.75
RCE1Q9Y256 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCE1Q9Y256 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.75■□□□□ 0.75
RCE1Q9Y256 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.75■□□□□ 0.75
RCE1Q9Y256 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCE1Q9Y256 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCE1Q9Y256 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.75■□□□□ 0.75
RCE1Q9Y256 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.75■□□□□ 0.75
RCE1Q9Y256 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RCE1Q9Y256 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.74■□□□□ 0.75
RCE1Q9Y256 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RCE1Q9Y256 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 AL136116.3-201ENST00000402907 1138 ntBASIC19.74■□□□□ 0.75
RCE1Q9Y256 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.74■□□□□ 0.75
RCE1Q9Y256 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.74■□□□□ 0.75
RCE1Q9Y256 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.74■□□□□ 0.75
RCE1Q9Y256 C1orf229-201ENST00000623686 2258 ntBASIC19.74■□□□□ 0.75
RCE1Q9Y256 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RCE1Q9Y256 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.74■□□□□ 0.75
RCE1Q9Y256 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RCE1Q9Y256 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCE1Q9Y256 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.73■□□□□ 0.75
RCE1Q9Y256 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RCE1Q9Y256 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 LINC00526-201ENST00000581067 1875 ntBASIC19.73■□□□□ 0.75
RCE1Q9Y256 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 DUX4L19-201ENST00000557448 1267 ntBASIC19.73■□□□□ 0.75
RCE1Q9Y256 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.73■□□□□ 0.75
RCE1Q9Y256 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.73■□□□□ 0.75
RCE1Q9Y256 AL499627.2-201ENST00000606283 725 ntBASIC19.73■□□□□ 0.75
RCE1Q9Y256 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RCE1Q9Y256 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.73■□□□□ 0.75
RCE1Q9Y256 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCE1Q9Y256 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RCE1Q9Y256 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.73■□□□□ 0.75
RCE1Q9Y256 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
RCE1Q9Y256 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCE1Q9Y256 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.72■□□□□ 0.75
RCE1Q9Y256 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RCE1Q9Y256 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RCE1Q9Y256 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCE1Q9Y256 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCE1Q9Y256 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RCE1Q9Y256 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCE1Q9Y256 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCE1Q9Y256 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.72■□□□□ 0.75
RCE1Q9Y256 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RCE1Q9Y256 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCE1Q9Y256 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCE1Q9Y256 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.72■□□□□ 0.75
RCE1Q9Y256 AC008406.3-201ENST00000620001 1374 ntBASIC19.71■□□□□ 0.75
RCE1Q9Y256 PKD1P6-201ENST00000343738 4769 ntBASIC19.71■□□□□ 0.75
RCE1Q9Y256 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RCE1Q9Y256 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RCE1Q9Y256 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RCE1Q9Y256 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RCE1Q9Y256 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RCE1Q9Y256 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RCE1Q9Y256 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RCE1Q9Y256 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RCE1Q9Y256 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCE1Q9Y256 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RCE1Q9Y256 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.7■□□□□ 0.74
RCE1Q9Y256 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCE1Q9Y256 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCE1Q9Y256 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.7■□□□□ 0.74
RCE1Q9Y256 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCE1Q9Y256 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms