Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.38■□□□□ 0.85
CTPS2Q9NRF8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CTPS2Q9NRF8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.38■□□□□ 0.85
CTPS2Q9NRF8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTPS2Q9NRF8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.38■□□□□ 0.85
CTPS2Q9NRF8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTPS2Q9NRF8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTPS2Q9NRF8 ESRRAP2-201ENST00000418437 1549 ntBASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 AC242852.2-201ENST00000615738 1807 ntBASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 AL356441.2-201ENST00000443009 864 ntBASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTPS2Q9NRF8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTPS2Q9NRF8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTPS2Q9NRF8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.36■□□□□ 0.85
CTPS2Q9NRF8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.36■□□□□ 0.85
CTPS2Q9NRF8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.36■□□□□ 0.85
CTPS2Q9NRF8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.36■□□□□ 0.85
CTPS2Q9NRF8 AC080038.3-201ENST00000623346 1952 ntBASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 AC009102.2-201ENST00000606772 1639 ntBASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTPS2Q9NRF8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 LINC01529-204ENST00000636474 1715 ntBASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 AL117332.1-201ENST00000622628 974 ntBASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 AC127496.7-201ENST00000625110 1798 ntBASIC20.34■□□□□ 0.85
CTPS2Q9NRF8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.33■□□□□ 0.85
CTPS2Q9NRF8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
CTPS2Q9NRF8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
CTPS2Q9NRF8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CTPS2Q9NRF8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTPS2Q9NRF8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
CTPS2Q9NRF8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CTPS2Q9NRF8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTPS2Q9NRF8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTPS2Q9NRF8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 AL356740.2-201ENST00000601559 647 ntBASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 AC087742.1-201ENST00000575880 1738 ntBASIC20.32■□□□□ 0.84
CTPS2Q9NRF8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms