Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 AC079630.1-202ENST00000618127 1840 ntBASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R3EQ9H7J1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PPP1R3EQ9H7J1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 AC009299.2-201ENST00000482477 511 ntBASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R3EQ9H7J1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 BX664725.1-201ENST00000438252 379 ntBASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 AC080038.3-201ENST00000623346 1952 ntBASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R3EQ9H7J1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PPP1R3EQ9H7J1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PPP1R3EQ9H7J1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PPP1R3EQ9H7J1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 AC239859.2-201ENST00000444165 318 ntBASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R3EQ9H7J1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms