Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 RPL5P28-201ENST00000418634 693 ntBASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 MTND4LP7-201ENST00000431728 294 ntBASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 AL391152.1-201ENST00000554160 1111 ntTSL 2 BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 CD226-202ENST00000577287 1009 ntTSL 3 BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AL132875.1-201ENST00000403623 949 ntBASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 NDUFA5P10-201ENST00000432147 357 ntBASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AP000542.1-201ENST00000448473 371 ntBASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 BLNK-209ENST00000495266 440 ntTSL 5 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AC107401.1-201ENST00000503426 685 ntBASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 BNIP3P30-201ENST00000601184 574 ntBASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AC012213.4-201ENST00000606457 354 ntBASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AP002360.4-201ENST00000606980 481 ntBASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AC010975.3-201ENST00000618727 978 ntBASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AP002967.1-201ENST00000624203 539 ntBASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRTAP3-3Q9BYR6 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 RNU6-650P-201ENST00000365658 111 ntBASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 ANAPC10P1-201ENST00000395991 556 ntBASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 POLR2H-202ENST00000429568 878 ntTSL 2 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 HNRNPH3P1-201ENST00000431935 583 ntBASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 MTCO2P20-201ENST00000437339 673 ntBASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 NPM1P49-201ENST00000448027 714 ntBASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 AC008991.2-201ENST00000587850 487 ntTSL 3 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 AC009464.1-201ENST00000615731 469 ntBASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
KRTAP3-3Q9BYR6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 PCF11-AS1-201ENST00000602322 1516 ntBASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 AC239868.4-201ENST00000608318 671 ntBASIC13.4□□□□□ -0.26
KRTAP3-3Q9BYR6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 HMGB3P5-201ENST00000428894 612 ntBASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 AL590408.1-201ENST00000430905 453 ntTSL 3 BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 AC114402.2-201ENST00000432760 643 ntBASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 AC008417.1-201ENST00000510014 565 ntBASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 AC008549.1-201ENST00000512900 643 ntBASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 AC022826.1-201ENST00000519383 805 ntBASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 BLOC1S6-208ENST00000565323 688 ntTSL 2 BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 AL356055.1-201ENST00000602528 446 ntBASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 ELOCP35-201ENST00000604289 336 ntBASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 AC112694.2-201ENST00000623697 768 ntBASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC13.39□□□□□ -0.27
KRTAP3-3Q9BYR6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 MRPL47-203ENST00000476781 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 AMTN-201ENST00000339336 1037 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms