Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NEK1Q96PY6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NEK1Q96PY6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NEK1Q96PY6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
NEK1Q96PY6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.05■■□□□ 1.76
NEK1Q96PY6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NEK1Q96PY6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NEK1Q96PY6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.05■■□□□ 1.76
NEK1Q96PY6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
NEK1Q96PY6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NEK1Q96PY6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
NEK1Q96PY6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
NEK1Q96PY6 AL136116.3-201ENST00000402907 1138 ntBASIC26.04■■□□□ 1.76
NEK1Q96PY6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
NEK1Q96PY6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
NEK1Q96PY6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NEK1Q96PY6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
NEK1Q96PY6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NEK1Q96PY6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
NEK1Q96PY6 EP400NL-214ENST00000641289 2402 ntBASIC26.04■■□□□ 1.76
NEK1Q96PY6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NEK1Q96PY6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.04■■□□□ 1.76
NEK1Q96PY6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
NEK1Q96PY6 ECEL1P1-201ENST00000373592 1742 ntBASIC26.03■■□□□ 1.76
NEK1Q96PY6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NEK1Q96PY6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NEK1Q96PY6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.03■■□□□ 1.76
NEK1Q96PY6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.03■■□□□ 1.76
NEK1Q96PY6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.03■■□□□ 1.76
NEK1Q96PY6 AC079834.2-201ENST00000609776 1949 ntBASIC26.03■■□□□ 1.76
NEK1Q96PY6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.03■■□□□ 1.76
NEK1Q96PY6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.03■■□□□ 1.76
NEK1Q96PY6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
NEK1Q96PY6 SYT6-210ENST00000641643 1587 ntBASIC26.03■■□□□ 1.76
NEK1Q96PY6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
NEK1Q96PY6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.02■■□□□ 1.76
NEK1Q96PY6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NEK1Q96PY6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NEK1Q96PY6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NEK1Q96PY6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.02■■□□□ 1.76
NEK1Q96PY6 SERBP1P1-201ENST00000396021 1160 ntBASIC26.02■■□□□ 1.76
NEK1Q96PY6 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.02■■□□□ 1.76
NEK1Q96PY6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
NEK1Q96PY6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
NEK1Q96PY6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.02■■□□□ 1.76
NEK1Q96PY6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
NEK1Q96PY6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
NEK1Q96PY6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
NEK1Q96PY6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.02■■□□□ 1.76
NEK1Q96PY6 AC242852.2-201ENST00000615738 1807 ntBASIC26.02■■□□□ 1.76
NEK1Q96PY6 AC080038.3-201ENST00000623346 1952 ntBASIC26.02■■□□□ 1.76
NEK1Q96PY6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NEK1Q96PY6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
NEK1Q96PY6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.01■■□□□ 1.76
NEK1Q96PY6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
NEK1Q96PY6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.01■■□□□ 1.75
NEK1Q96PY6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
NEK1Q96PY6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.01■■□□□ 1.75
NEK1Q96PY6 DUX4L19-201ENST00000557448 1267 ntBASIC26.01■■□□□ 1.75
NEK1Q96PY6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.01■■□□□ 1.75
NEK1Q96PY6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26■■□□□ 1.75
NEK1Q96PY6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
NEK1Q96PY6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
NEK1Q96PY6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26■■□□□ 1.75
NEK1Q96PY6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
NEK1Q96PY6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NEK1Q96PY6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NEK1Q96PY6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NEK1Q96PY6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
NEK1Q96PY6 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.99■■□□□ 1.75
NEK1Q96PY6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.99■■□□□ 1.75
NEK1Q96PY6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NEK1Q96PY6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NEK1Q96PY6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.99■■□□□ 1.75
NEK1Q96PY6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
NEK1Q96PY6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK1Q96PY6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.98■■□□□ 1.75
NEK1Q96PY6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK1Q96PY6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK1Q96PY6 AL138724.1-201ENST00000606771 1088 ntBASIC25.98■■□□□ 1.75
NEK1Q96PY6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
NEK1Q96PY6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.98■■□□□ 1.75
NEK1Q96PY6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
NEK1Q96PY6 LINC00526-201ENST00000581067 1875 ntBASIC25.98■■□□□ 1.75
NEK1Q96PY6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.98■■□□□ 1.75
NEK1Q96PY6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
NEK1Q96PY6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.97■■□□□ 1.75
NEK1Q96PY6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.97■■□□□ 1.75
NEK1Q96PY6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms