Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP3BQ96NU0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CNTNAP3BQ96NU0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP3BQ96NU0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP3BQ96NU0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 AC128676.1-201ENST00000454392 318 ntBASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 AC133637.1-201ENST00000624115 1537 ntBASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.07■□□□□ 0.96
CNTNAP3BQ96NU0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3BQ96NU0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.05■□□□□ 0.96
CNTNAP3BQ96NU0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CNTNAP3BQ96NU0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP3BQ96NU0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP3BQ96NU0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.04■□□□□ 0.96
CNTNAP3BQ96NU0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CNTNAP3BQ96NU0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.04■□□□□ 0.96
CNTNAP3BQ96NU0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP3BQ96NU0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP3BQ96NU0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 AC133552.2-202ENST00000575694 574 ntBASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3BQ96NU0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.02■□□□□ 0.96
CNTNAP3BQ96NU0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP3BQ96NU0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP3BQ96NU0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.02■□□□□ 0.96
CNTNAP3BQ96NU0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP3BQ96NU0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.02■□□□□ 0.96
CNTNAP3BQ96NU0 MIR4497-201ENST00000583208 89 ntBASIC21.02■□□□□ 0.96
CNTNAP3BQ96NU0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.02■□□□□ 0.96
CNTNAP3BQ96NU0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.02■□□□□ 0.96
CNTNAP3BQ96NU0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CNTNAP3BQ96NU0 AC141586.4-201ENST00000624558 1573 ntBASIC21.02■□□□□ 0.95
CNTNAP3BQ96NU0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms