Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RITA1Q96K30 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RITA1Q96K30 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RITA1Q96K30 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RITA1Q96K30 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RITA1Q96K30 SERBP1P1-201ENST00000396021 1160 ntBASIC17.67■□□□□ 0.42
RITA1Q96K30 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RITA1Q96K30 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RITA1Q96K30 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RITA1Q96K30 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RITA1Q96K30 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RITA1Q96K30 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RITA1Q96K30 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RITA1Q96K30 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RITA1Q96K30 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RITA1Q96K30 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RITA1Q96K30 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RITA1Q96K30 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RITA1Q96K30 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.66■□□□□ 0.42
RITA1Q96K30 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RITA1Q96K30 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RITA1Q96K30 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.66■□□□□ 0.42
RITA1Q96K30 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RITA1Q96K30 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RITA1Q96K30 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RITA1Q96K30 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
RITA1Q96K30 ESRRAP2-201ENST00000418437 1549 ntBASIC17.66■□□□□ 0.42
RITA1Q96K30 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RITA1Q96K30 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RITA1Q96K30 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.66■□□□□ 0.42
RITA1Q96K30 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RITA1Q96K30 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RITA1Q96K30 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RITA1Q96K30 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
RITA1Q96K30 LINC01960-201ENST00000563759 1884 ntBASIC17.65■□□□□ 0.42
RITA1Q96K30 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RITA1Q96K30 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.65■□□□□ 0.42
RITA1Q96K30 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.65■□□□□ 0.42
RITA1Q96K30 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
RITA1Q96K30 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.65■□□□□ 0.42
RITA1Q96K30 AC080038.3-201ENST00000623346 1952 ntBASIC17.65■□□□□ 0.42
RITA1Q96K30 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RITA1Q96K30 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RITA1Q96K30 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RITA1Q96K30 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RITA1Q96K30 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.65■□□□□ 0.42
RITA1Q96K30 SYT6-210ENST00000641643 1587 ntBASIC17.65■□□□□ 0.42
RITA1Q96K30 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RITA1Q96K30 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
RITA1Q96K30 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RITA1Q96K30 AC008406.3-201ENST00000620001 1374 ntBASIC17.65■□□□□ 0.42
RITA1Q96K30 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RITA1Q96K30 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RITA1Q96K30 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.64■□□□□ 0.41
RITA1Q96K30 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RITA1Q96K30 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.64■□□□□ 0.41
RITA1Q96K30 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RITA1Q96K30 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.64■□□□□ 0.41
RITA1Q96K30 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RITA1Q96K30 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RITA1Q96K30 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RITA1Q96K30 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RITA1Q96K30 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.64■□□□□ 0.41
RITA1Q96K30 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RITA1Q96K30 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RITA1Q96K30 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.63■□□□□ 0.41
RITA1Q96K30 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RITA1Q96K30 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RITA1Q96K30 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RITA1Q96K30 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.63■□□□□ 0.41
RITA1Q96K30 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.63■□□□□ 0.41
RITA1Q96K30 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RITA1Q96K30 AC092171.4-201ENST00000609130 632 ntBASIC17.63■□□□□ 0.41
RITA1Q96K30 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.63■□□□□ 0.41
RITA1Q96K30 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.62■□□□□ 0.41
RITA1Q96K30 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.62■□□□□ 0.41
RITA1Q96K30 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RITA1Q96K30 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
RITA1Q96K30 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.62■□□□□ 0.41
RITA1Q96K30 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RITA1Q96K30 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.62■□□□□ 0.41
RITA1Q96K30 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.62■□□□□ 0.41
RITA1Q96K30 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.62■□□□□ 0.41
RITA1Q96K30 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RITA1Q96K30 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RITA1Q96K30 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.62■□□□□ 0.41
RITA1Q96K30 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RITA1Q96K30 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RITA1Q96K30 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RITA1Q96K30 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms