Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNF8Q96H20 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.59■■□□□ 1.21
SNF8Q96H20 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.59■■□□□ 1.21
SNF8Q96H20 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNF8Q96H20 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNF8Q96H20 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNF8Q96H20 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
SNF8Q96H20 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.59■■□□□ 1.21
SNF8Q96H20 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNF8Q96H20 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
SNF8Q96H20 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.58■■□□□ 1.21
SNF8Q96H20 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNF8Q96H20 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.58■■□□□ 1.21
SNF8Q96H20 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
SNF8Q96H20 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNF8Q96H20 AC103724.3-201ENST00000564481 992 ntBASIC22.58■■□□□ 1.21
SNF8Q96H20 AC009086.3-201ENST00000623486 1008 ntBASIC22.58■■□□□ 1.21
SNF8Q96H20 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.58■■□□□ 1.21
SNF8Q96H20 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
SNF8Q96H20 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SNF8Q96H20 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
SNF8Q96H20 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
SNF8Q96H20 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.57■■□□□ 1.2
SNF8Q96H20 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.57■■□□□ 1.2
SNF8Q96H20 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SNF8Q96H20 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.57■■□□□ 1.2
SNF8Q96H20 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.57■■□□□ 1.2
SNF8Q96H20 MIR6722-201ENST00000617286 78 ntBASIC22.57■■□□□ 1.2
SNF8Q96H20 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SNF8Q96H20 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.57■■□□□ 1.2
SNF8Q96H20 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNF8Q96H20 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SNF8Q96H20 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SNF8Q96H20 PKD1P6-201ENST00000343738 4769 ntBASIC22.56■■□□□ 1.2
SNF8Q96H20 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SNF8Q96H20 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.56■■□□□ 1.2
SNF8Q96H20 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SNF8Q96H20 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.56■■□□□ 1.2
SNF8Q96H20 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.56■■□□□ 1.2
SNF8Q96H20 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SNF8Q96H20 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SNF8Q96H20 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.55■■□□□ 1.2
SNF8Q96H20 AC010542.4-201ENST00000563151 1910 ntBASIC22.55■■□□□ 1.2
SNF8Q96H20 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.55■■□□□ 1.2
SNF8Q96H20 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SNF8Q96H20 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SNF8Q96H20 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SNF8Q96H20 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.55■■□□□ 1.2
SNF8Q96H20 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.55■■□□□ 1.2
SNF8Q96H20 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.55■■□□□ 1.2
SNF8Q96H20 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SNF8Q96H20 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SNF8Q96H20 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SNF8Q96H20 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SNF8Q96H20 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
SNF8Q96H20 YBX1P4-201ENST00000392794 808 ntBASIC22.54■■□□□ 1.2
SNF8Q96H20 DUX4L4-201ENST00000566884 1269 ntBASIC22.54■■□□□ 1.2
SNF8Q96H20 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
SNF8Q96H20 KRT8P33-201ENST00000508125 1423 ntBASIC22.54■■□□□ 1.2
SNF8Q96H20 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SNF8Q96H20 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.54■■□□□ 1.2
SNF8Q96H20 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.53■■□□□ 1.2
SNF8Q96H20 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.53■■□□□ 1.2
SNF8Q96H20 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.53■■□□□ 1.2
SNF8Q96H20 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.53■■□□□ 1.2
SNF8Q96H20 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.53■■□□□ 1.2
SNF8Q96H20 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SNF8Q96H20 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.53■■□□□ 1.2
SNF8Q96H20 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNF8Q96H20 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNF8Q96H20 FAM99A-202ENST00000538190 1989 ntBASIC22.52■■□□□ 1.2
SNF8Q96H20 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.52■■□□□ 1.2
SNF8Q96H20 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNF8Q96H20 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.52■■□□□ 1.2
SNF8Q96H20 AC026310.3-201ENST00000625186 2373 ntBASIC22.52■■□□□ 1.2
SNF8Q96H20 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SNF8Q96H20 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.52■■□□□ 1.2
SNF8Q96H20 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.52■■□□□ 1.2
SNF8Q96H20 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.52■■□□□ 1.2
SNF8Q96H20 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNF8Q96H20 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms