Protein–RNA interactions for Protein: Q96BT1

C3orf49, Putative uncharacterized protein C3orf49, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49Q96BT1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 AC099791.2-201ENST00000605725 427 ntBASIC20.02■□□□□ 0.8
C3orf49Q96BT1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 LINC00526-201ENST00000581067 1875 ntBASIC20.02■□□□□ 0.8
C3orf49Q96BT1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
C3orf49Q96BT1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
C3orf49Q96BT1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.01■□□□□ 0.79
C3orf49Q96BT1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C3orf49Q96BT1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C3orf49Q96BT1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C3orf49Q96BT1 SRD5A1P1-201ENST00000442297 786 ntBASIC20■□□□□ 0.79
C3orf49Q96BT1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20■□□□□ 0.79
C3orf49Q96BT1 pRNA.6-201ENST00000610482 90 ntBASIC20■□□□□ 0.79
C3orf49Q96BT1 pRNA.5-201ENST00000612139 90 ntBASIC20■□□□□ 0.79
C3orf49Q96BT1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
C3orf49Q96BT1 pRNA.11-201ENST00000618423 90 ntBASIC20■□□□□ 0.79
C3orf49Q96BT1 pRNA.13-201ENST00000619112 90 ntBASIC20■□□□□ 0.79
C3orf49Q96BT1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
C3orf49Q96BT1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
C3orf49Q96BT1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
C3orf49Q96BT1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
C3orf49Q96BT1 AC080038.3-201ENST00000623346 1952 ntBASIC19.99■□□□□ 0.79
C3orf49Q96BT1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C3orf49Q96BT1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.98■□□□□ 0.79
C3orf49Q96BT1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 AC139530.1-201ENST00000575312 1977 ntBASIC19.97■□□□□ 0.79
C3orf49Q96BT1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 AC133637.1-201ENST00000624115 1537 ntBASIC19.97■□□□□ 0.79
C3orf49Q96BT1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 MIR4466-201ENST00000606121 54 ntBASIC19.97■□□□□ 0.79
C3orf49Q96BT1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf49Q96BT1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms